Re: [PyMOL] visualize mode

2015-06-18 Thread Osvaldo Martin
Hi, Do you want to do something similar to porcupine plots? If so, check the porcupine function in this Ipython notebook . Cheers, Osvaldo. On Thu, Jun 18, 2015 at 5:07 PM, Command Line wrote: Hi all, > wh

[PyMOL] visualize mode

2015-06-18 Thread Command Line
Hi all, when visualizing motion or modes (like NMA), is it possible to show the velocities as small arrows on all the moving atoms? B-values are not an option, since I want to see the 3D motion of the atoms. Thanks -- _