Re: [PyMOL] on PDB

2015-11-25 Thread Smith Liu
Dear All, For get view, we get something like set_view (\ 0.999876618, -0.000452542, -0.015699286,\ 0.000446742,0.99821, -0.000372844,\ 0.015699454,0.000365782,0.999876678,\ 0.0,0.0, -150.258514404,\ 11.842411041, 2

Re: [PyMOL] on PDB

2015-11-25 Thread Andreas Forster
http://www.pymolwiki.org/index.php/Modeling_and_Editing_Structures Andreas On Thu, Nov 26, 2015 at 2:24 AM, Smith Liu wrote: > Dear Shane, > > get_view is a nice command. Is any way to change the original PDB based on > what we get by set_view to get the new pdb? > > Smith > > > > > > > At 20

Re: [PyMOL] on PDB

2015-11-25 Thread Smith Liu
Dear Shane, get_view is a nice command. Is any way to change the original PDB based on what we get by set_view to get the new pdb? Smith At 2015-11-26 03:54:32, "Shane Caldwell" wrote: Hi Smith, You can type >get_view and copy the output into a txt file for later use. The outpu

Re: [PyMOL] on PDB

2015-11-25 Thread David Hall
http://pymolwiki.org/index.php/Save ?? -David > On Nov 24, 2015, at 9:45 PM, Smith Liu wrote: > > Dear All, > > Suppose the original PDB was not oriented. Once we have it oriented by pymol, > is any way we can save the new PDB oriented? > > Smith > > > > > --

Re: [PyMOL] on PDB

2015-11-25 Thread Shane Caldwell
Hi Smith, You can type >get_view and copy the output into a txt file for later use. The output set_view command will return the window to the same camera settings Shane Shane Caldwell McGill University On Tue, Nov 24, 2015 at 9:45 PM, Smith Liu wrote: > Dear All, > > Suppose the original PD