Hi Jim -
This is something we've been talking about changing. The entire scene as
viewed within PyMOL is inside that block, including the camera position. (The
interior surface of the block itself provides the background color of the
scene.) Some viewers, e.g. Mac Preview.app, default to
I installed v 1.8.0.6
When I save ‘myfile.dae’ and then import into MeshLab, all I get is a solid
gray block.
What do I need to do in PyMOL to export my DNA structure?
Thanks.
Jim
James Kress Ph.D., President
The KressWorks® Foundation
An IRS Approved 501 (c)(3)
Hi H. Adam -
Try the http://pymolwiki.org/index.php/Distancetoatom script by Andreas
Warnecke and use it to set b (or your own custom property in recent Incentive
PyMOL versions) based on the distance from a point.
Hope that helps.
Cheers,
Jared
--
Jared Sampson
Columbia University
On Mar
I have a pdb ‘xyz1’ and create a mapA, then create a surfA.
set surface_quality, 1
alter all, b=50
alter all, q=1
set gaussian_resolution,5
map_new mapA, gaussian, 1, sele or pdb, 6
isosurface surfA, mapA
I can then color that surfA with any solid color.
How can one color the surfA with a
Dear Colleagues,
This is a reminder that the application deadline for the 9th annual CCP4/APS
crystallographic school is on April 21, 2016. Applications received after this
date will not be considered.
The school will take place from June 21 through June 29, 2016 at the Advanced
Photon Source,
