Re: [PyMOL] Secondary structure labeling

. Bishwa Subedi bsub...@btk.fimailto:bsub...@btk.fi -- Learn Graph Databases - Download FREE O'Reilly Book Graph Databases is the definitive new guide to graph databases and their applications. This 200-page book is written

[PyMOL] Selecting residues witin a range

Hi, Is it possible to select the residues within a range of specific distance using PyMOL? I am a biological student so any inbuilt commands would be convenient. However, any suggestion to do so would ease my work. Best regards, Bishwa

[PyMOL] informative figure

Hi all, I would like to make a figure of my protein-ligand complex for publication. I would like to clearly show the density for the ligand in the binding cavity. I tried to show it as mesh but the figure is not very informative. Can anyone help me with clear steps how to get such informative

[PyMOL] Retriving my PDB file

Hi, I altered the secondary structure of the protein using alter command. I have the PDB file with the correct secondary structure and their appropriate length. But how can I save this information into my PDB coordinate file such that when I reopen the file I do not have to repeat the command