[PyMOL] Please remove my emal address from your bulletin board

2010-04-22 Thread Charles David Stout
Dear PyMol developers, PyMol is an awesome program, but I'm a casual user. Please remove my email address from your bulletin board. Thanks Dave Stout 4-22-10 d...@scripps.edu --

[PyMOL] how to add labels in PyMol

2009-03-21 Thread Charles David Stout
It's a hassle to always add labels to PyMol figures in Photoshop How do you do this in PyMol? e.g. I want to label 'Trp42' next to its alpha-carbon (on chain B). The examples in the help manual are obscure. Thanks C. D. Stout 3-20-09

[PyMOL] displaying crystallographic symmetry in PyMol

2008-09-09 Thread Charles David Stout
I want to create a packing diagram from many molecules in the unit cell when the structure is one monomer - I tried- def set_symmetry(protein_name, 62.843 62.843 82.339 90.00 90.00 120.00, spacegroup="P6122") and get a syntax error. How is this done? Thanks, Dave 9-9-08

[PyMOL] drawing bonds in PyMOL

2008-05-23 Thread Charles David Stout
How does one bond two atoms, such as Fe and heme N, without having all the CONECT records in the PDB file? Thanks Dave Stout 5-23-08 begin:vcard fn:C. D. Stout n:Stout;C. D. org:The Scripps Research Institute;Dept. of Molecular Biology adr;dom:;;10550 N. Torrey Pines Rd., MB8;La Jolla;CA;92037 em