I’m dealing with 4 heterogeneous structures belonging to the same fold. I’d
like to compare some conserved structural features and for this purpose it
would be useful that the structures are aligned and then visualised in a grid.
I understand that the align command works for 2 structures only.
upgrading if you can.
>
> Best,
> Jarrett J
>
> On Thu, Oct 28, 2021 at 9:31 AM George Tzotzos via PyMOL-users
> <mailto:pymol-users@lists.sourceforge.net>> wrote:
> Hi everybody,
>
> I’d be grateful for any suggestions regarding the editing of labels.
>
Hi everybody,
I’d be grateful for any suggestions regarding the editing of labels.
I’ve labeled a few residues and I’m trying to give them a better placing in the
structure. I’m using mouse/2 button editing. Clicking on control and then
moving the labels works, but alas as soon as I release
d job on proteins
>> with decent sequence similarity (identity >30%).For comparing proteins with
>> lower sequence identity, the super and cealign commands perform better.
>> pymolwiki.org
>> <https://urldefense.proofpoint.com/v2/url?u=http-3A__pymolwiki.org_=DwMFaQ=G2MiLlal7SX
Apologies if this is trivial but I’m rather new to Pymol.
I’m loading a script (x.py) that allows me to visualise correlations in the
atomic movements of my protein. I have no problems with this.
My next task is to load the native pdb file (e.g y.pdb) of the same protein but
in a different
of the problem?
>
>
>> On 24 Apr 2020, at 14:39, Tamas Hegedus wrote:
>>
>> Use a selection in your commands in your scripts. Set the selection to one
>> of your proteins in one of your script and the selection to the other one in
>> the other script.
>>
>
Below is a summary of a task I’m trying to implement in pymol
1. Load 2 proteins
2. Align them (align prt1, prt2)
3. Use grid_slot to display the proteins side by side
4. Load two different scripts (one for each protein)
Step 4 is where I get stuck. Each script is applied to both proteins.
Is
