[PyMOL] Problems with set solvent_radius

2011-04-15 Thread Ian Slaymaker
I am trying to change the solvent radius for the surface of about 20 objects in my scene simultaneously. I "set solvent_radius, 4" and pymol seems to take the time to do all the calculations, but at the end of the processing the surface only displays for one out of the 20 objects. "rebuild" does no

[PyMOL] movie with morph and electrostatics

2011-03-15 Thread Ian Slaymaker
? Thank you! Ian Slaymaker -- Colocation vs. Managed Hosting A question and answer guide to determining the best fit for your organization - today and in the future. http://p.sf.net/sfu/internap

Re: [PyMOL] Rendering Large Scene Crashes Pymol

2011-03-09 Thread Ian Slaymaker
Upgrading to 64 bit version of licensed Pymol 1.3 fixed all rendering issues. On Wed, Mar 2, 2011 at 1:33 PM, Jason Vertrees < jason.vertr...@schrodinger.com> wrote: > Hi Ian & Tsjerk, > > > You can try to set hash_max (set hash_max,200) to put a limit on memory > > usage. Then again, an immediat

[PyMOL] Rendering Large Scene Crashes Pymol

2011-03-02 Thread Ian Slaymaker
I am trying to Render out a very large scene in pymol, on a 64-bit windows 7 computer, and as soon as I try and raytrace, pymol crashes with no useful error message. I tried creating a pov file, and rendering with pov-ray, but pymol still crashed. What are my options for rendering out my scene, if