[PyMOL] b.pdb

Just a funny thing... If I try to color my cartoon with rainbow. The file name can't be b.pdb. I get an error: Selector-Error: Misplaced ). Selector-Error: Malformed selection. ( ( ( byres ( b )<-- If I rename the file and load it, coloring works fine. -Lari-

Re: [PyMOL] Cavity display?

side of the surface? best regards, ~Lari~ »»»»»» Lari Lehtiö University of Helsinki Institute of Biotechnology Macromolecular X-ray crystallography P.O.Box 65 00014 HY Finland »» Quoting Dirk Kostrewa : # Dear PyMol us

Re: [PyMOL] Stereo help!

Are you sure about the aspect ratio? If not just do ray and check the resolution of the png. Then multiply the horisontal and vertical resolution by a number and use the commands you mentioned. Or maybe it picks up only one 2000, I have never actually tried that. Taller figures are usually easi

[PyMOL] apbs map size

coloured according to the electrostatics. I tried with and without an external psize.py, but the result was the same. Does anyone know a workaround for this? ~Lari~ ___ Lari Lehtiö University of Helsinki Institute of Biotechnology Macromolecular X-ray

Re: [PyMOL] Setting transparency for CGOs

~Lari~ ___ Lari Lehtiö University of Helsinki Institute of Biotechnology Macromolecular X-ray crystallography P.O.Box 65 00014 HY Finland http://www.biocenter.helsinki.fi/~lehtio/ ___ Quoting tanri...@stud.uni-frankfurt.de: # Hi everybody, # # i've ju