[PyMOL] code for calculating surface area

Hi, Could someone point me to the code used to calculate surface area (i.e. code to calculate surface dots and the code to find the area of the dots)? I presume that it is somewhere in the PyMOL\modules\pymol or PyMOL\modules\chempy modules. Thanks, Michael

[PyMOL] improving interoperability between python molecule toolkits

rom various toolkits. I am interested in other people's thoughts on this matter. Michael Sorich PhD Student School of Pharmaceutical, Molecular and Biomedical Sciences University of South Australia Email: michael.sor...@postgrads.unisa.edu.au mike_sor...@hotmail.com --- Outgoin

[PyMOL] mesh spheres

rather than the surface of the atom spheres. Thanks Michael Sorich PhD Student School of Pharmaceutical, Molecular and Biomedical Sciences University of South Australia Email: michael.sor...@postgrads.unisa.edu.au mike_sor...@hotmail.com --- Outgoing mail is certified Virus Free

[PyMOL] transparent sphere

Hi I wish to draw a sphere with either a semi-transparent or mesh surface. I can create a sphere as a cgo, however this has an opaque surface. Any help would be appreciated Michael Sorich PhD Student School of Pharmaceutical, Molecular and Biomedical Sciences University of South Australia

[PyMOL] Wizard and External GUI documenation

Is there any documentation (or self-explanatory examples) on how to make a Wizard and/or External GUI? Thanks Michael Sorich PhD Student School of Pharmaceutical, Molecular and Biomedical Sciences University of South Australia Email: michael.sor...@postgrads.unisa.edu.au mike_sor

[PyMOL] problem loading molecule using commands

Hi, I am having a little trouble loading a molecule from the command line PyMOL>load "test/dat/pept.pdb" ObjectMoleculeLoadPDBFile-Error: Unable to open file! I can load the molecule using the external GUI, though. What have I done wrong? Thanks Michael Sorich PhD Stud