[PyMOL] Need help in calculating buried surface area

2023-08-24 Thread Mukhopadhyay, Shreya via PyMOL-users
Hello Everyone, I am trying to find a way to calculate the buried surface area in a complex with 2 molecules using pymol. Can anyone direct me to the correct way to do it? I am currently trying out the following method, and I need to find out if there is anything else I need to do to do this ca

[PyMOL] separate two molecule as an object from a complex of four molecules

2023-08-02 Thread Mukhopadhyay, Shreya via PyMOL-users
Public Hello All, I am trying to separate out two molecules(one copy for each of RSVF F1 and F2) from one pdb (6OUS). It's a trimeric protein bound to a Fab. I want to separate out RSVF1 and F2 proteins as one object from the bound antibody, ie create one object with only chains A,C,E and B,D,