Re: [PyMOL] Surface and SASA

2003-02-16 Thread Peter C. McCluskey
war...@sunesis.com (Warren L. DeLano) writes: >If someone can find a better open-source surface calculation code, I'd be >happy to include it in PyMOL as an option. The only catches: it must be >written in C, and it must be available under a BSD-style open-source >license (free for commercial use

Re: [PyMOL] Secondary structure assignments

2002-08-27 Thread Peter C . McCluskey
I've got a crude interface to the RasMol code which lets you run RasMol's secondary structure assignment code from PyMOL at: http://www.rahul.net/pcm/rasmolapi.tar.gz I don't make any promises as to how well it works or whether I will ever get around to cleaning up the ugly code. If there are

Re: [PyMOL] Secondary structure assignments

2002-08-20 Thread Peter C. McCluskey
dee...@iastate.edu (dee...@iastate.edu) writes: >On Mon, Jul 29, 2002 at 01:12:40PM -0400, Nathaniel Echols wrote: > >> How hard would it be to incorporate the DSSP algorithm? I was looking at >> the source for RasMol, which has a complete implementation. My feeling is >> that this could be port