Dear pymol users,
I would like to calculate vander waals interaction of a patricular
residue in a pdb. kindly tell me how to do it?
Thanks in advance
Surya
Graduate student
India.
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Dear Users,
I have one pdb file and would like to find the pi-pi interactions and
cation-pi interactions in it. Is it possible to find by pymol. If it does
by pymol, kindly tell me how to do it.
thanks in advance
Surya
Graduate student
India.
Dear Pymol Users
I would like to represent the protein what I have in ball and stick model.
I have done it by executing the command lines as following
hide all
show spheres
show sticks
set sphere_scale, 0.3
set stick_radius, 0.1
My question is can I do it by any other method? Means from pymol
Dear pymol users
I have been trying to build imidazol ring to one incomplete His of my pdb
file by using builder in pymol. After finishing this ring I saved and
opened once again by pymol. I have seen some thing like mess formation with
in the residues. I request you to tell me what could be the
Dear pymol users
I have been trying to build imidazol ring to one incomplete His of my pdb
file by using builder in pymol. After finishing this ring I saved and
opened once again by pymol. I have seen some thing like mess formation with
in the residues. I request you to tell me what could be the