[PyMOL] protein contact potential

Hi All- would anybody know by which calculations pymol generates the proteins' electrostatic maps? Is there a place where I can read about it? I tried the manual and the wikipymol and could not find it. Thanks, Juliana

[PyMOL] Setting transparency

Hi All- does anyone know how to set transparency to a small portions of a molecule: for example, in a 150-aa molecule, set the first 10 residues to be transparent? thanks a lot! cheers, juliana

[PyMOL] generating pdb coordinates

Hi all- I was wondering if it is possible to generate coordinates in a .pdb file from the docking I made using pymol. thank you, Juliana