>
> Hi, Rob,
>
thank you for you reply and modification of the script. now Ican calculate
the surface area. but when I calculate the surface of part protein, it seem
that the surface area including the surface adjacent with other residues,
means the sum of two fragments is much larger than whole
Hi, all
I download APBS1.2.1bwin.zip,and release it. then run Apbs Tools in Pymol.
after i choose the apbs binary location at /apbs-1.2.1/bin, there are some
error as information following, I only find the install method for Linux, is
there any way to set up apbs in Windows?
OSError Exception in
Dear Robert,
I downloaded the msms 2.6.1 from
http://mgltools.scripps.edu/downloads#msms and
installed into C:\Program Files\MSMS. But there are still something wrong
after running the script:
There seems to be a problem with the msms output
Traceback (most recent call last):
File "C:\Program
Hi All,
When I run the script download from
http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/, I issue the commond:
calc_msms_area 2mlt-melittin, there are always something wrong as follows:
CmdLoad: "D:/singapore-NTU/HU/modelling/2MLT-melittin.pdb" loaded as
"2MLT-melittin".
PyMOL>run C:/Prog
Hi All,
When i run the script download from
http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/, I issue the commond:
calc_msms_area 2mlt-melittin, there are always something wrong as follows:
CmdLoad: "D:/singapore-NTU/HU/modelling/2MLT-melittin.pdb" loaded as
"2MLT-melittin".
PyMOL>run C:/Prog
