If you are more comfortable with PyMOL commands, use a .pml file (somewhat
like the gnuplot script you mentioned).
If you prefer Python, use a .py file, and import the necessary modules
(pymol, cmd from pymol, etc.). You can find working Python scripts that
call pymol in many places.
To color
On Jul 31 2011, Thomas Holder wrote:
>Hi Jeff,
>
>> I have several questions about extending PyMOL via modules or plugins.
>>
>> It appears that the primary difference between the two is windows for
modules are created at during start up and plugin windows can be brought
up
>> on demand (from
I have several questions about extending PyMOL via modules or plugins.
It appears that the primary difference between the two is windows for
modules are created at during start up and plugin windows can be brought up
on demand (from the plugins menu). Are there other differences?
What is the cu
Hi,
I have finally gotten the PyMOL source (SVN revision 3937) compiled and
running using the 32 bit Fink Python2.6 package on Mac OS 10.6.6. If there
is interest, I could write down the steps I took to do so.
My main reason for doing this is to be able to start PyMOL from a Python
program. If
