Re: [PyMOL] [EXTERNAL] Generate electrostatics by Python command

2023-05-18 Thread Petro
Hi Blaine. Thank you for your reply. I was not clear. I meant the surface which can be generated via action -> generate -> vacuum electrostatic -> protein contact potential (local) Is there a way to access it via Python? Thank you and best regards. Petro. On Wed, 17 May 2023 at 17:32, Mooers, Bl

Re: [PyMOL] [EXTERNAL] Generate electrostatics by Python command

2023-05-18 Thread Mooers, Blaine H.M. (HSC)
Hi Petro, APBS is a plugin and not directly part of PyMOL. You can run apbs from the command line via subprocess in Python. https://apbs.readthedocs.io/en/latest/using/index.html Best regards, Blaine Blaine Mooers, Ph.D. Associate Professor Department of Biochemistry and Molecular Biology, Co