Hi David
On Thu, 10 Sep 2009 14:47:43 -0700 (PDT) David Hall dwash59_2...@yahoo.com
wrote:
Is there any documentation on getting information out of alignment objects
into scripts? I tried looking around the wiki, but I didn't see anything.
I'm just wondering things like if I have a residue
Hi,
Is it posible in pymol to select all residues of a certain type
automatically, like all arginines or all lysines + arginines in a chain?
Maia
--
Let Crystal Reports handle the reporting - Free Crystal Reports 2008
Maia,
select all_arg_lys, resn arn+lys
Cheers,
Warren
-Original Message-
From: Maia Cherney [mailto:ch...@ualberta.ca]
Sent: Friday, September 11, 2009 2:03 PM
To: pymol-users@lists.sourceforge.net
Subject: Re: [PyMOL] Alignment Objects
Hi,
Is it posible in pymol to select all
On Fri, Sep 11, 2009 at 1:59 PM, Maia Cherney ch...@ualberta.ca wrote:
Is it posible in pymol to select all residues of a certain type
automatically, like all arginines or all lysines + arginines in a chain?
select resnam arg
select chain A and (resnam lys or resnam arg)
Is there any documentation on getting information out of alignment objects into
scripts? I tried looking around the wiki, but I didn't see anything.
I'm just wondering things like if I have a residue in one object, finding the
residue in another object that has been aligned.
Thanks,
David
Dear PyMOL community,
I am trying to use the align command (from within python)
and want to evaluate the pairwise matches.
the command
cmd.align(sel1, sel2, object=alignment)
should do. Sorry for this stupid question,
but how do I get hold of the alignment object, and what is its
-Original Message-
From: pymol-users-ad...@lists.sourceforge.net
[mailto:pymol-users-ad...@lists.sourceforge.net] On Behalf Of
Andreas Henschel
Sent: Friday, January 28, 2005 9:18 AM
To: pymol-users@lists.sourceforge.net
Subject: [PyMOL] Alignment objects
Dear PyMOL community,
I
