[PyMOL] Color changes during a morph

2013-03-25 Thread Max NANAO
Hi All, Can anyone tell me how I might change the colors of a specific selection during the course of a rigimol generated morph? I would like one domain to go from purple to green, and have so far been unable to figure out how to do it. I tried coloring the different start/final states

Re: [PyMOL] Color changes during a morph

2013-03-25 Thread Thomas Holder
Hi Max, you use a named color newcolor and change it's values at each iteration, but all states refer to this same color. Before I show you how to fix your script, could you give spectrum_states from the PyMOLWiki a try? It's a script which does exactly what you want: