Re: [PyMOL] launching pymol from a script

2010-01-20 Thread Alan
Hi there, Please, did someone check that? It would be very appreciated. Thanks Alan On Mon, Jan 4, 2010 at 16:49, Alan wrote: > Hi there, > > I use both pymol via Fink (on MBP 10.6.2) all in 64 bits and MacPymol 1.2r3 > (licensed to PDBe). > > Both work fine but I tried > http://pymolwiki.org/

[PyMOL] launching pymol from a script

2010-01-04 Thread Alan
Hi there, I use both pymol via Fink (on MBP 10.6.2) all in 64 bits and MacPymol. Both work fine but I tried http://pymolwiki.org/index.php/Launching_From_a_Script with 1) export PYTHONPATH=/Applications/MacPyMOL.app/pymol/modules 2) export PYTHONPATH=/sw/lib/pymol-py26/modules and running 'la

[PyMOL] Launching

2006-07-06 Thread Terry Jones
I've just installed pymol 0.99rc6 on Mac OS X (10.3.9). Because I'm still running Panther and I no longer have the system python installed (instead I have 2.4) I couldn't use macpymol-0_99rc6.tar.gz as pymol no longer comes with its own copy of python. macpymol-0_99rc6.tar.gz fails trying to load s

RE: [PyMOL] launching PyMol from a python function

2005-10-25 Thread Warren DeLano
f > Dmitriy Igor Bryndin > Sent: Tuesday, October 25, 2005 7:58 AM > To: pymol-users@lists.sourceforge.net > Subject: [PyMOL] launching PyMol from a python function > > I'm trying to start PyMol from another python program. > After the 0_99beta17 it is possible to st

[PyMOL] launching PyMol from a python function

2005-10-24 Thread Dmitriy Igor Bryndin
I'm trying to start PyMol from another python program. After the 0_99beta17 it is possible to start it from the __main__ part of a code. But when I start PyMol from a function 'pymol.finish_launching()' goes in an endless loop. Here goes an example: ---

[PyMOL] launching PyMOL on cygwin

2004-10-13 Thread John P. Sutter
Dear fellow PyMOL users, I have been trying to install PyMOL on a cygwin platform on my Windows XP computer. So far I have built and installed PyMOL using the commands python setup.py build python setup.py install python setup2.py in my pymol directory. This generated a script named "pymol" (no

Re: [PyMOL] pymol launching problems from python???

2004-03-08 Thread Taner Yildirim
Dear Warren, Thank you very much for your response. Yes, I tried ./pymol.com command and it works fine with and without the external gui. The only problem is launching pymol from python. I looked at the pymol email list and noticed similar reports. Hence I am not the only one having this problem

[PyMOL] Fw: pymol launching problems from python???

2004-03-02 Thread Taner Yildirim
Taner Yildirim To: pymol-users@lists.sourceforge.net Sent: Tuesday, March 02, 2004 4:51 PM Subject: pymol launching problems from python??? Dear PyMol Experts, I am quite new in pymol. I have just installed python 2.3.2 and pymol-0.93 using "python setup.py" (i.e. pymol was install

[PyMOL] pymol launching problems from python???

2004-03-02 Thread Taner Yildirim
Dear PyMol Experts, I am quite new in pymol. I have just installed python 2.3.2 and pymol-0.93 using "python setup.py" (i.e. pymol was installed in site-packages of python). I am using RedHat 8.0 on a dual Xeon system. Here's the problems that I am getting: (1) Case 1: >>> import pymol >>