Hello:
Not exactly sure what you are asking here but if you want to calculate the
distance moved you could use the distance command:
distance atomx, atomy
to tell you how far atoms in the residues has moved.
you can also calculate dihedrals (ie/ X values) using the dihedral command
dihedral name_
Hi,
I am a new user of Pymol. I am currently working on mutant protein structures
and I would like to compare the side chain shift between the mutant and
wild-type structures. May I know how could I measure the side chain shift?
Thanks a lot!
Phoebe
