subject:"\[PyMOL\] Optimize Geometry \{rpblem"

Re: [PyMOL] Optimize Geometry {rpblem

2015-07-10 Thread Osvaldo Martin

I Stephen I am confused, the problem is with Avogadro, or with the PyMOL's optimize plugin ? I tried to replicate the problem (with the plugin) and I get the correct answer (the chair conformation) Cheers, Osvaldo On Fri, Jul 10, 2015 at 11:04 AM, S

[PyMOL] Optimize Geometry {rpblem

2015-07-10 Thread Stephen P. Molnar

I have a bit of a strange problem. I have evaluated a number of Linux distributions in a VMware Player environment on my 64 bit laptop. I compile PyMol using the attached protocol. The OS is BioLinux v-8.0.5 with Avogadro Version 1.1.1 Library V