Hi Jens,
the "run" command is not identical to the python "import" statement. It
does not search sys.path but takes an absolute or relative (from the
current working directory) file name.
Both of these will work:
PyMOL>run /opt/pymol/scripts/align_all.py
PyMOL>import align_all
See also:
http:/
Hi,
I'm trying to run the align_all.py script
(http://pldserver1.biochem.queensu.ca/~rlc/work/pymol/align_all.py) in PyMol
running on Linux.
I've put the script in /opt/pymol/scripts, and in my .pymolrc file, I have the
following:
sys.path.append("/opt/pymol/scripts")
and if I print sys.path
