Hello guys,
Regarding the subject mentioned above, I'm wondering if PDB file has more than
one chain, will the generation of contact map using g_mdmat from Gromacs
still produce a map of all chains?
Don't I have a choice to choose one chain?
Refer the subject above for more details:
Hi Suhaila,
From what I understand from the wiki, you have to have a match between
the PDB and the contact map. If your contact map was made on a
structure with multiple chains, all chains will be in there. If you
want to select a single chain, you have to extract that chain from
thhe PDB file,
