Hi.
I tried a little:
*test1.pml*
# See http://www.pymolwiki.org/index.php/Peptide_Sequence
# See http://www.pymolwiki.org/index.php/propka
reinitialize
cd C:\Users\tlinnet\Desktop
python
for aa in CVGLTSW:
cmd._alt(string.lower(aa))
python end
create pdb1, cys
remove cys
delete cys
save
Hi Maurício,
what you describe here is called homology modeling. Although PyMOL has
some modeling capabilities, I'd strongly recommend to use a real
homology modeling tool such as MODELLER to do this.
http://salilab.org/modeller/
Hope that helps.
Cheers,
Thomas
Maurício Menegatti Rigo
