Indeed batch mode would not be what I wanted.
Thanks for the hints, I'll give it a try.
I guess I'll also have to look at the glob module.
Am 01.09.10 15:55, schrieb Michael F. Summers:
> My favorite way to do this is to add the following to an alias file that is
> sourced upon login:
>
>
Michael,
That's a great idea.
You can also specify which MacPyMOL you want via:
open -a MacPyMOL
open -a PyMOLX11Hybrid
open -a PyMOLX11Zalman
Just make sure you have those copies of MacPyMOL installed before
issuing the command.
Cheers,
-- Jason
On Wed, Sep 1, 2010 at 9:55 AM, Michael F. Su
My favorite way to do this is to add the following to an alias file that is
sourced upon login:
alias pm '/Applications/MacPyMol.app/Contents/MacOS/MacPyMOL $*'
With this approach, you can "cd" to any directory that contains a pdb file of
interest,
and type: pm filename.pdb
Pymol launches, o
Hi Martin,
I know a few ways to do this:
1) If you've set your Mac up to load PDB files with PyMOL by default, you
can just type "open *.pdb" from the command line.
2) Instead of using OS X's open command, you can launch PyMOL directly via
"/Applications/PyMOLX11Hybrid.app/Contents/MacOS/MacPyMO
Dear All
I'm using Mac OS X and would like to start PyMOL from the command line,
so I can open up .pdb files from a command line argument by issuing $
pymol -c /directory/*pdb (for some reason, within pymol it seems to be
not possible to issue 'PyMOL > *pdb').
When I enter 'pymol' in the Termi
