Dear Pymol users!
I want to examine protein-ligand interactions observed in the md trajectory
using Pymol.
For such task I have 100 snapshots of the protein-ligand complex which I've
loaded into the pymol. Now I want to extract from all snapshots 100 ligands
as the separate 100 objects and save
I want to examine protein-ligand interactions observed in the md
trajectory using Pymol.
For such task I have 100 snapshots of the protein-ligand complex which
I've loaded into the pymol. Now I want to extract from all snapshots 100
ligands as the separate 100 objects and save it in the
Thomas, thanks for help!
As I understood fconv can be used for the split several mol2 (or pdb) files
which was placed in 1 model to the several pdb files, doesnt it ?
In past I forced with some problems with g_hbond. Is there any other way
to monitor h bonds along the trajectory (e.g in vmd) ?
