Re: [PyMOL] Visualizing two surfaces using APB2tools2.1

2011-02-02 Thread Yarrow Madrona
Thank you very much. I had trouble with Jason's method but the second one worked great! Now I have beautifull e-static surfaces to show at my talk. Thank you! -Yarrow > Thanks for the nice writeup, Jason! > > There are two main ways that I know of to visualize two potentials at > once. > This

Re: [PyMOL] Visualizing two surfaces using APB2tools2.1

2011-02-01 Thread Michael Lerner
Thanks for the nice writeup, Jason! There are two main ways that I know of to visualize two potentials at once. This is one. If you're looking at, e.g., a protein-protein interface, it may be useful to map two different electrostatic potentials to two different PyMOL objects. Here's my overly-caut

Re: [PyMOL] Visualizing two surfaces using APB2tools2.1

2011-02-01 Thread Jason Vertrees
Hi Yarrow, > Does anyone know how to visualize the surface potentials of two molecules > simoutaneously using the APBS Tools2.1 plugin?  Thanks. As Michael wrote the APBS plugin, he might have more to offer, but here's how I'd do it. I used this technique to look at two similar proteins side-by-

[PyMOL] Visualizing two surfaces using APB2tools2.1

2011-01-31 Thread Yarrow Madrona
Hello, Does anyone know how to visualize the surface potentials of two molecules simoutaneously using the APBS Tools2.1 plugin? Thanks. -Yarrow -- Yarrow Madrona Graduate Student Molecular Biology and Biochemistry Dept. University of California, Irvine Natural Sciences I, Rm 2403 Irvine, CA