Re: [PyMOL] morph issues

2016-04-26 Thread harold steinberg
onegger Annemarie >>>>>> wrote: >>>>>> >>>>>> Hi Adam >>>>>> >>>>>> This additional letter means that you have an alternative conformation >>>>>> for the atom, therefore you do not have a

Re: [PyMOL] morph issues

2016-04-26 Thread Honegger Annemarie
>> conformations (remove (not alt “”+A)) or restrict the selection to those >>>>> atoms, the morph should work. >>>>> >>>>> best regards >>>>> >>>>> Annemarie >>>>> ___ >>>>

Re: [PyMOL] morph issues

2016-04-26 Thread Thomas Holder
the alternative >>>>> conformations (remove (not alt “”+A)) or restrict the selection to those >>>>> atoms, the morph should work. >>>>> >>>>> best regards >>>>> >>>>> Annemarie >>>>> ___

Re: [PyMOL] morph issues

2016-04-26 Thread harold steinberg
gt;>>> ___ >>>> >>>> Dr. Annemarie Honegger PhD >>>> Department >>>> of Biochemistry >>>> Zürich University >>>> Winterthurerstrasse 190 >>>> CH-8057 Zürich >>>> Switzerland

Re: [PyMOL] morph issues

2016-04-26 Thread harold steinberg
ioc.uzh.ch/plueckthun >> http://www.bioc.uzh.ch/plueckthun/antibody >> http://www.bioc.uzh.ch/plueckthun/nanowelt >> >> >> >> >> >>> >>> >>> Message: 6 >>> Date: Mon, 25 Apr 2016 20:54:01 -0500 >>> From: h

Re: [PyMOL] morph issues

2016-04-26 Thread harold steinberg
/plueckthun > http://www.bioc.uzh.ch/plueckthun/antibody > http://www.bioc.uzh.ch/plueckthun/nanowelt > > > > > >> >> >> Message: 6 >> Date: Mon, 25 Apr 2016 20:54:01 -0500 >> From: harold steinberg >> Subject: [PyMOL] morph issues >

Re: [PyMOL] morph issues

2016-04-26 Thread Honegger Annemarie
/plueckthun http://www.bioc.uzh.ch/plueckthun/antibody http://www.bioc.uzh.ch/plueckthun/nanowelt > > > Message: 6 > Date: Mon, 25 Apr 2016 20:54:01 -0500 > From: harold steinberg > Subject: [PyMOL] morph issues > To: pymol-users > Message-ID: <0e82e310-1d03-40cd-

[PyMOL] morph issues

2016-04-25 Thread harold steinberg
Hi all, I need to generate a morph from 3J5R to 3J5Q. When I load both files and generate the morph, it’s all messed up. When I generate a morph of other structures it works just fine. In the structures that do not morph correctly a sample selection is: /3j5r/A/B/ILE`573/CD1 /3j5q/C/E/ILE`573/C