Re: [PyMOL] New Ideas

On Fri, Feb 5, 2010 at 1:36 PM, Sean Law wrote: > Is it possible to include a function that could easily add or delete states > (from the beginning, middle, or end of a set of states)? > > Something with the following syntax: > > delete_states 14 #Deletes state 14 > delete

Re: [PyMOL] New Ideas

Is it possible to include a function that could easily add or delete states (from the beginning, middle, or end of a set of states)? Something with the following syntax: delete_states 14 #Deletes state 14 delete_states 10-20 #Delete states 10-20 d

Re: [PyMOL] new ideas

Hi Jason, Just to remind you. You promised to put back FreeMol and let us know about it. I am waiting. I need to move structures independently. Maia Jason Vertrees wrote: > Maia, > > You can already move structures independently. If you install > PyMOL+FreeMOL you can have access to the MMFF-

Re: [PyMOL] new ideas

       if freemol_libpy not in sys.path: > modules/pymol/__init__.py:                    sys.path.append(freemol_libpy) > > > Hopefully this all helps. > > -David > > > > - Original Message >> From: Maia Cherney >> To: Jason Vertrees >>

Re: [PyMOL] new ideas

rees > Cc: pymol-users@lists.sourceforge.net > Sent: Wed, January 20, 2010 9:37:46 PM > Subject: Re: [PyMOL] new ideas > > Thanks, > > But I could not find the download site for FreeMol. > > Could somebody send me a link to FreeMol? > > Maia > > Jason Ve

Re: [PyMOL] new ideas

Thanks, But I could not find the download site for FreeMol. Could somebody send me a link to FreeMol? Maia Jason Vertrees wrote: > Maia, > > You can already move structures independently. If you install > PyMOL+FreeMOL you can have access to the MMFF-enabled PyMOL that will > allow you to do s

Re: [PyMOL] new ideas

Maia, You can already move structures independently. If you install PyMOL+FreeMOL you can have access to the MMFF-enabled PyMOL that will allow you to do small molecule cleanup and editing. Try putting your mouse into "Editing Mode" and moving atoms around. It's not hard. Check this out: http:/

Re: [PyMOL] new ideas

Hi Jason I need such features. I open two different pdbs and I want to manually move one structure relative to another. I want to dock one structure into another or superpose 2 structures manually. Is it possible? Or I want to move a fragment of the molecule relative to the rest of the molecu