[PyMOL] print out distance

2010-07-14 Thread elsa.livoti
Hello, I used a simple script to calculate the distance between two objects called chain_a and chain_c in the range of 1 A, graphically the script works and in the monitor is possible observe the distance and the residues involved, I have some problems to print out the distance values and the

Re: [PyMOL] print out distance

2010-07-14 Thread Jason Vertrees
Hi Elsa, Good first attempt. cmd.distance will return the distance between two atoms or the average distance if you give it more than two. Most surely your chain A and chain C each have more than one atom each. So, you just get the average distance. I'm not sure what exact distances you want