Hi,
I was wondering if there is a work around to get the PyMOL app to launch in OS
X 10.10 (Yosemite)? Currently, when trying to launch the app from
/Applications folder it does nothing. I have the new XQuartz.
When I try to launch it using terminal, I get this error:
$python launch_pymol.py
Traceback (most recent call last):
File "launch_pymol.py", line 27, in <module>
modules_path = os.environ['PYMOL_PATH']+'/modules'
File
"/Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/UserDict.py",
line 23, in __getitem__
raise KeyError(key)
KeyError: 'PYMOL_PATH'
If I try to launch from the MacPyMOL in the /Contents/MacOS folder, I get this
error:
/Applications/MacPyMOLhybrid.app/Contents/MacOS/MacPyMOL ; exit;
'import site' failed; use -v for traceback
LookupError: no codec search functions registered: can't find encoding
Traceback (most recent call last):
File "<string>", line 1, in <module>
ImportError: No module named os
Traceback (most recent call last):
File "<string>", line 1, in <module>
NameError: name 'sys' is not defined
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/Applications/MacPyMOLhybrid.app/pymol/modules/pymol/__init__.py", line
32, in <module>
import copy
ImportError: No module named copy
Traceback (most recent call last):
File "<string>", line 1, in <module>
NameError: name 'pymol' is not defined
PyMOL-ERROR: can't find module 'invocation'logout
Any ideas on how to fix this?
Thank you for your help!
Ryan
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