Thanks, I have all my answers !
Fabrice Carles - PhD student
Structural Bioinformatics & Chemoinformatics,
Institut de Chimie Organique et Analytique (ICOA)
University of Orleans - France
2018-03-16 13:41 GMT+01:00 Thomas Holder :
> Hi Fabrice,
>
> Interesting observation. PyMOL reads "metalc"
Hi Fabrice,
Interesting observation. PyMOL reads "metalc" bonds from mmCIF files and
represents them as "zero order" bonds. Apparently this breaks double bond
detection in your given example. This is something we need to fix.
Possible workarounds:
1) Load .pdb files instead of .cif files
2) Loa
Dear pymol users,
I would like to know if there is a way to change pymol2 settings in order
to fit older version.
My problem is very simple. Pymol 2 and pymol 1.8 do not provide the same
results.
I download and select the ATP molecule in both pymol 1.8.6.0. and 2.0.7:
cmd.fetch('1atp')
cmd.sele