Hi Yeping -
Yes, I can. But there is one additional requirement: to save all the states,
you must add a `state=0` keyword argument to the save command to include all
states. Otherwise, the default is `state=-1`, which includes only the current
state.
http://www.pymolwiki.org/index.php/Save
Dear Jared,I am using Open Source PyMOL 1.6.0.0. If you save the whole virus
structure as a single pdb file, and reload it into pymol and then show it as
cartoon, can you still display the whole structure? As for me, it can display
only one chain shown as cartoon_loop.Best regards.
Yeping Sun