Dear pymol users:
Usually pymol can show only one chain when you open a pdb file of virus
particles (such as 2buk,1sva, etc.). I am trying to create the whole virus
particle and I know it may need applying symmetry operations. And these
symmetry operation has been given in the pdb files. For
Hi Yeping,
Searching for pymol biomt gives this page on the pymol wiki:
http://www.pymolwiki.org/index.php/BiologicalUnit
Should have all the information you need.
Best regards,
Folmer
2013/2/28 yp sun sunyep...@yahoo.com.cn
Dear pymol users:
Usually pymol can show only one chain when
Hi Yeping and Troels,
symexp is unlikely to give you the REMARK 350 biomolecule, it is for
generating neighboring symmetry mates of the crystallographic packing.
The following scripts from the PyMOLWiki can read REMARK 350 and
generate the biological unit:
http://pymolwiki.org/index.php/Psico -
Hi Yeping -
Try using:
fetch 2buk, type=pdb1, multiplex=1, async=0
This will fetch the biological assembly (type=pdb1) from the pdb, split the 60
states into separate objects (multiplex=1), and tell PyMOL to wait for all this
to be completed before moving to the next command in a .pml script
