Hi Claire,
All you need to do is:
1) Create selections for the two atoms you want to H-bond. There are
several different ways to do this in PyMOL (see the manual for details),
but for example, to bond
chain A, Thr 15 OG1
chain D, Asp 184 OD1
you would do
select donor,
Hi there,
Sorry I'm going to ask probably a very basic question but could anyone
tell me how to create H-bonds in pymol?
I used SPDB viewer to model the interface between two dimers in a
tetrameric molecule. I now need to create some good pictures of this for
my thesis as SPDB isn't really good