After I reinstalled everything, it finally works for me. The key is to set
LD_LIBRARY_PATH to find the shared HDF5 library. I still think that the
install procedure is not as clean as I'd expect. For example, I still need to
set HDF5_DIR even it is under /usr/local and instruction says it'd l
That makes a lot of sense, and that's why it's a warning not fatal error.
However, I cannot get the runtime library (libhdf5.so.5?) when running my
program even I set the LD path environments. I even copied libhdf5.so.5 to
/usr/local/lib and still no success. I think I'm going to rebuild pyta
Dinesh B Vadhia (el 2008-05-10 a les 10:10:29 -0700) va dir::
> I'm using the OS filesystem to store 32,000 images files. I'm now
> going to move them into a datastore and the choices are pysqlite or
> MySQL or PyTables. The number of images will grow rapidly (to the
> millions and more) and hen
Pan, Jianfu (GSFC-610.2)[ADNET] (el 2008-05-10 a les 15:42:46 -0500) va dir::
> I'm jumping into the pytables/HDF5 world, but I'm having problem
> installing it. I have HDF5 installed in /usr/local/hdf5, which
> contains three subdirectories: bin, include and lib. When I tried to
> install pytab
This is my first post. Thanks for your help.
I am having a weird problem with my first attempt to use PyTables.
In ipython, this works:
import tables
h5f = tables.open...
tbl = h5f.root.ratings
row in tbl.row
row[column] = 3
row.append()
...but if I run the same code from a file ("python foo.py
I'm jumping into the pytables/HDF5 world, but I'm having problem installing it.
I have HDF5 installed in /usr/local/hdf5, which contains three subdirectories:
bin, include and lib. When I tried to install pytables (with HDF5_DIR set), I
got the following message:
* Found HDF5 headers at ``/
I'm using the OS filesystem to store 32,000 images files. I'm now going to
move them into a datastore and the choices are pysqlite or MySQL or PyTables.
The number of images will grow rapidly (to the millions and more) and hence
performance is critical. Multiple images will be accessed from t
