Re: anyone with genomewide microarray analysis experience ?

2009-08-15 Thread Istvan Albert
On Aug 14, 8:52 am, trias wrote: > Does anyone have some scripts I could use for this purpose. I work with > S.cerevisiae Since the largest chromosome on the yeast genome is around 4 million bp, the easiest way to accomplish your goal is to create a list of the same size as the chromosome, then

Re: anyone with genomewide microarray analysis experience ?

2009-08-14 Thread Jochen Schulz
trias: > > One of the things I would like to do is to fetch all data from a certain > distance from gene ATGs say 100+/- bp and calculate the bp average over all > genes over this region. I know absolutely nothing about your problem domain, but if your distance function is metric, you can use t

anyone with genomewide microarray analysis experience ?

2009-08-14 Thread trias
over this region. The microarray data has been normalised over each bp Does anyone have some scripts I could use for this purpose. I work with S.cerevisiae Thank you -- View this message in context: http://www.nabble.com/anyone-with-genomewide-microarray-analysis-experience---tp24971224p24971224