[Rd] PGI 6.1 compile error

2006-05-11 Thread Paul Gilbert
I am trying to compile R-2.3.0 (both first release and patched 2006-05-10) on Red Hat Enterprise Linux AS release 3 (Taroon Update 7) using the Portland Group compiler version 6.1 and the notes from Jennifer Lai on p33 of "R Installation and Administration" version 2.3.0 (2006-04-24). I have no

Re: [Rd] @ accesses attributes, not just formal slots ?

2006-05-11 Thread Prof Brian Ripley
On Thu, 11 May 2006, Parlamis Franklin wrote: > Using the '@' operator, I am able to extract a 'names' attribute > assigned to a formal object. > However, I can not use the replacement form ('@<-') to assign that > attribute. > > > setClass("foo", representation("numeric")) > [1] "foo" > > (new("f

Re: [Rd] S4 initialize methods, unexpected recursive callNextMethod

2006-05-11 Thread Seth Falcon
John Chambers <[EMAIL PROTECTED]> writes: > It's a bug resulting from the combination of: > 1. multiple recursive levels of callNextMethod() > 2. nonstandard arguments in the method definition; that is, (.Object, > x) vs .Object, ...) for the generic. Thanks for the explanation and work aro

[Rd] @ accesses attributes, not just formal slots ?

2006-05-11 Thread Parlamis Franklin
Using the '@' operator, I am able to extract a 'names' attribute assigned to a formal object. However, I can not use the replacement form ('@<-') to assign that attribute. > setClass("foo", representation("numeric")) [1] "foo" > (new("foo", 1:4)->a) An object of class “foo” [1] 1 2 3 4 > na

Re: [Rd] bug report - cor (PR#8852)

2006-05-11 Thread ligges
[EMAIL PROTECTED] wrote: > Full_Name: daniel t. O'Shea > Version: 2.2.1 Please read how to report a bug: Please check at least the latest release, which is R-2.3.0! > OS: xp > Submission from: (NULL) (156.98.28.4) > > > using the cor command in the base package. > > cor(x,y) > Please read h

[Rd] bug report - cor (PR#8852)

2006-05-11 Thread daniel . oshea
Full_Name: daniel t. O'Shea Version: 2.2.1 OS: xp Submission from: (NULL) (156.98.28.4) using the cor command in the base package. cor(x,y) x is a matrix (15 rows and 1000 columns). I did not specify a column and R crashed - shut down. error signature AppName:rgui.exe AppVer 2.21.51220.0 Mo

Re: [Rd] S4 initialize methods, unexpected recursive callNextMethod

2006-05-11 Thread John Chambers
It's a bug resulting from the combination of: 1. multiple recursive levels of callNextMethod() 2. nonstandard arguments in the method definition; that is, (.Object, x) vs .Object, ...) for the generic. Specifically, the callNextMethod code tries to build up a list of "excluded" classes, but in

Re: [Rd] Question about match.fun()

2006-05-11 Thread Prof Brian Ripley
On Tue, 9 May 2006, Berwin A Turlach wrote: > Dear all, > > I was recently contacted by a user about an alledged problem/bug in > the latest version of lasso2. After some investigation, we found out > that it was a user error which boils down to the following: > >> x <- matrix(rnorm(200), ncol=2)

Re: [Rd] (PR#8824) wishlist: summary for regression models to report

2006-05-11 Thread ripley
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Re: [Rd] Allowed quasibinomial links (PR#8851)

2006-05-11 Thread ripley
This was already corrected in R-devel (including allowing cauchit): I have moved the relevant part of the fix to R-patched now. On Wed, 10 May 2006, [EMAIL PROTECTED] wrote: > Full_Name: Henric Nilsson > Version: 2.3.0 Patched (2006-05-09 r38014) > OS: Windows 2000 SP4 > Submission from: (NULL) (

Re: [Rd] 2.3.0 make install fails on solaris

2006-05-11 Thread Prof Brian Ripley
This is already changed in R-patched: please use that. On Wed, 10 May 2006, Peter Dalgaard wrote: > Darin Perusich <[EMAIL PROTECTED]> writes: > >> hello r development team, >> >> i'm building R 2.3.0 on solaris and when i run the 'make install' i'm >> getting a syntax error during the "installin

Re: [Rd] suppressing "global" cppflags in an individual package

2006-05-11 Thread Simon Urbanek
Kasper, On May 11, 2006, at 12:37 AM, Kasper Daniel Hansen wrote: > Thank you Simon, a little comment below > > On May 9, 2006, at 2:49 PM, Simon Urbanek wrote: > >> On May 9, 2006, at 1:11 PM, Kasper Daniel Hansen wrote: >> >>> It is indeed the case that after updating to GCC 4 the package >>>