Re: [Rd] R-based version of R CMD build broken on Windows

2010-06-11 Thread Uwe Ligges
On 10.06.2010 23:16, Hervé Pagès wrote: Hi, The R-based version of R CMD build doesn't work for me on Windows: E:\biocbld\bbs-2.7-bioc>R\bin\R CMD build meat\Biobase * checking for file 'meat\Biobase/DESCRIPTION' ... OK * preparing 'Biobase': * checking DESCRIPTION meta-information ... OK * c

[Rd] CHM help does not find help docs in package stats

2010-06-11 Thread Thaler, Thorn, LAUSANNE, Applied Mathematics
Hi all, currently I'm working on an R package bundling some frequently used functions. When I load my package and type ?one_of_my_functions I get the particular help file. If I try to get help on another function, which is part of package stats (prcomp say), I get "This program cannot display th

Re: [Rd] OWL ontologies in R?

2010-06-11 Thread Vincenzo Carey
The Rredland package available through Bioconductor (www.bioconductor.org) will parse and do limited modeling of RDF; some OWL examples are in the vignette. Some years ago a package called Rswub included an interface to Jena, but became stale. Developments in R-java interfaces since then might ma

Re: [Rd] R-based version of R CMD build broken on Windows

2010-06-11 Thread Hervé Pagès
Uwe Ligges wrote: On 10.06.2010 23:16, Hervé Pagès wrote: Hi, The R-based version of R CMD build doesn't work for me on Windows: E:\biocbld\bbs-2.7-bioc>R\bin\R CMD build meat\Biobase * checking for file 'meat\Biobase/DESCRIPTION' ... OK * preparing 'Biobase': * checking DESCRIPTION meta-i

[Rd] support for radix order() over entire range of integers

2010-06-11 Thread Michael Lawrence
Hi, Is there any good reason not to allow radix sorting via order() over the entire range of R (32bit) integers, instead of setting a hard limit at 100,000? Many machines have plenty of memory to support this. Seems like it is just a matter of dynamic allocating the bucket array instead of the cur