[Rd] CRAN check fails on Solaris, any hints why?

2015-02-10 Thread Helske, Jouni
Dear all, I recently uploaded a new package Rlibeemd to CRAN (http://cran.r-project.org/web/packages/Rlibeemd/index.html, and in github: https://github.com/helske/Rlibeemd), and simple example in help files seems to throw an error on Solaris: Version: 1.3.1 Check: examples Result: ERROR Ru

Re: [Rd] WISH: eval() to preserve the "visibility" (now value is always visible)

2015-02-10 Thread Henrik Bengtsson
On Sun, Feb 8, 2015 at 8:44 PM, Suharto Anggono Suharto Anggono via R-devel wrote: > Sorry to intervene. No, I'm very happy you intervened. You're comment is 100% valid/correct making my wish moot. Your explanation is very clear and nails it; one should use eval(substitute(expr)) or evalq(expr)

[Rd] How to deal with functions detected as apparent S3 methods

2015-02-10 Thread Xavier Robin
Dear list, I am trying to clear the following note that is generated by an R CMD check --as-cran on my package (pROC): > * checking S3 generic/method consistency ... NOTE > Found the following apparent S3 methods exported but not registered: > ci.auc ci.coords ci.se ci.sp ci.thresholds roc.test

Re: [Rd] R CMD check: Uses the superseded package: ‘doSNOW’

2015-02-10 Thread Xavier Robin
Oh, I completely missed that one. It's very neat as it seems to work both on Windows and Unix. Thanks! Xavier On 10/02/15 10:52, Martyn Plummer wrote: > The CRAN package snow is superseded by the parallel package which is > distributed with R since version 2.14.0. Here are the release notes > >

Re: [Rd] R CMD check: Uses the superseded package: ‘doSNOW’

2015-02-10 Thread Martyn Plummer
The CRAN package snow is superseded by the parallel package which is distributed with R since version 2.14.0. Here are the release notes \item There is a new package \pkg{parallel}. It incorporates (slightly revised) copies of packages \CRANpkg{multicore} and \CRANpkg{snow} (excluding MPI, PVM