[Bioc-devel] Proper way of documenting a BiocGenerics generics with extended prototypes

2015-09-20 Thread Christian Arnold
Hi all, I am currently producing the documentation for a new hopefully soon-to-be-submitted Bioconductor package and I am facing some difficulties with R CMD check. In summary: I want to dispatch the existing generic for "counts" to make it usable with my object of type SNPhood as well. The

[Rd] summary(lmList) issues

2015-09-20 Thread Ben Bolker
Over on StackOverflow someone is trying to get this code to work: library("nlme") fm2Pixel.lis<-lmList(pixel~day+I(day^2)|Dog, Pixel) summary(fm2Pixel.lis) (results: Error in `[<-`(`*tmp*`, use, use, ii, value = lst[[ii]]) : subscript out of bounds)