[Bioc-devel] credential not recognized when git clone my packages

2021-01-09 Thread Zhu, Lihua (Julie)
Hi all, I encountered the following error when trying to use git clone or git push for g...@git.bioconductor.org:packages/CRISPRseek # git clone g...@git.bioconductor.org:packages/CRISPRseek Cloning into

Re: [Bioc-devel] activate BiocCredentials account issue

2021-01-09 Thread Yuzhou Chang
It works! Thank you! On Sat, Jan 9, 2021 at 7:21 PM Nitesh Turaga wrote: > Hi, > > This is because your account shows it is not activated. Please try to > activate your account > https://git.bioconductor.org/BiocCredentials/account_activation before > trying to log in. > > Best, > > Nitesh > >

Re: [Bioc-devel] activate BiocCredentials account issue

2021-01-09 Thread Nitesh Turaga
Hi, This is because your account shows it is not activated. Please try to activate your account https://git.bioconductor.org/BiocCredentials/account_activation before trying to log in. Best, Nitesh On 1/9/21, 5:58 AM, "Bioc-devel on behalf of Yuzhou Chang" wrote: Thank you for the

Re: [R-pkg-devel] CRAN check texi2dvi failure

2021-01-09 Thread Enrico Schumann
On Sat, 09 Jan 2021, Paul Gilbert writes: > I am trying to debug a problem that is appearing in the > linux and Solaris checks, but not Windows or Mac > checks, of my package tsfa as reported at > https://cran.r-project.org/web/checks/check_results_tsfa.html > > The problem is with re-building

Re: [Rd] URL checks

2021-01-09 Thread J C Nash
Is this a topic for Google Summer of Code? See https://github.com/rstats-gsoc/gsoc2021/wiki On 2021-01-09 12:34 p.m., Dirk Eddelbuettel wrote: > > The idea of 'white lists' to prevent known (and 'tolerated') issues, note, > warnings, ... from needlessly reappearing is very powerful and general,

Re: [Rd] URL checks

2021-01-09 Thread Dirk Eddelbuettel
The idea of 'white lists' to prevent known (and 'tolerated') issues, note, warnings, ... from needlessly reappearing is very powerful and general, and can go much further than just URL checks. I suggested several times in the past that we can look at the format Debian uses in its 'lintian'

Re: [Rd] Demo for linking native routines between R packages

2021-01-09 Thread Gábor Csárdi
On Sat, Jan 9, 2021 at 4:45 PM Joshua Ulrich wrote: [...] > > That said, WRE does list two packages that register native routines > from other packages: > > https://cran.r-project.org/doc/manuals/r-release/R-exts.html#Linking-to-native-routines-in-other-packages > > There are a bunch more, see

Re: [Rd] Demo for linking native routines between R packages

2021-01-09 Thread Joshua Ulrich
Hi David, On Wed, Jan 6, 2021 at 4:00 AM Jitao David Zhang wrote: > > Dear Davis, Dirk, Jan, and r-devel subscribers, > > I hope you have had a good start in the new year. > > For your information: I have updated the GitHub repository to demonstrate > linking native routines between R packages (

Re: [Bioc-devel] activate BiocCredentials account issue

2021-01-09 Thread Yuzhou Chang
Thank you for the response! I tried to use upper case, but I still failed to activate the account. my package name is "IRISFGM" and the Github link is https://github.com/BMEngineeR/IRISFGM Bests, Yuzhou On Fri, Jan 8, 2021 at 10:05 PM Martin Morgan wrote: > I am not sure but I think the app is