Re: [R-pkg-devel] cannot xtfrm data frames WARNING with R-devel

2021-02-06 Thread Sebastian Meyer
You should be able to reproduce and trace back the error by setting the environment variable _R_STOP_ON_XTFRM_DATA_FRAME_=TRUE while running your vignette code. This is not a false positive. You are probably trying to order(data.frame) somewhere. I think this will be disallowed in future

Re: [Rd] surprised matrix (1:256, 8, 8) doesn't cause error/warning

2021-02-06 Thread Wolfgang Huber
FWIW, I paste below a possible change to the warnings generating part of the do_matrix function in R/src/main/array.c that adds the kind of warning that Abby is asking for, and that IMHO would more often help users find bugs in their code than interfere with intended behaviour. > matrix (1:6,

[R-pkg-devel] cannot xtfrm data frames WARNING with R-devel

2021-02-06 Thread J. Aravind via R-package-devel
Dear R developers, I am facing an issue while submitting update to my package PGRdup (https://github.com/aravind-j/PGRdup). With R-devel Debian (2021-02-05 r7994) on submission a WARNING was reported as follows. . . . .Quitting from lines 536-542 (Introduction.Rmd) Error: processing vignette

Re: [Rd] sprintf, check number of parameters

2021-02-06 Thread Matthias Gondan
Dear developers, This is a follow-up from an earlier mail about warnings of unused arguments in sprintf: 1. This should obviously raise an error (and it does): sprintf('%i %i', 1) Fehler in sprintf("%i %i", 1) : zu wenig Argumente [= too few arguments] 2. This should, in my opinion, raise a

Re: [Bioc-devel] MOFA package deprecation

2021-02-06 Thread Britta Velten
Hi Lori, a quick follow up question on the package depreciation of Mofa which you took care of a while ago. Would it be possible to also have the pointer to mofa2 on the landing page of the package instead of only in the startup message? There it simply reads