[Rd] strange bahaviour of predict.lm

2020-03-16 Thread Moshe Olshansky via R-devel
Hello, Below is my code: > A <- matrix(rnorm(10*3),ncol=3) > b <- runif(10) > reg <- lm(b ~ A) > A1 <- matrix(rnorm(5*3),ncol=3) > A1 <- as.data.frame(A1) > b1 <- predict(reg,A1) Warning message: 'newdata' had 5 rows but variables found have 10 rows   And instead of being an array of length 5, b1

Re: [Rd] Duncan's retirement: who's taking over Rtools?

2017-09-28 Thread Moshe Olshansky via R-devel
I think that even though some Microsoft employees may have good intentions Microsoft as a company can not be trusted. There will be always a danger that they will try to create their own version of R which works only on Windows and that will become increasingly divergent from "other" R. We witne

Re: [Rd] Problem with a regular expression.

2017-08-17 Thread Moshe Olshansky via R-devel
I tried this on a Linux (Ubuntu) server invoking R from the command line and the result was the same, except that I could kill the R session from another terminal window. From: Rui Barradas To: Chris Triggs ; "r-devel@r-project.org" Cc: Thomas Lumley Sent: Thursday, 17 August 2017,

Re: [Rd] dist function in R is very slow

2017-06-18 Thread Moshe Olshansky via R-devel
Hi Stefan, You are right about the possible loss of accuracy computing the Euclidean distance the way I did. In some cases you probably even can get a negative value to compute a square root (so I am making all negative numbers 0). To do what I did one must know that it is all right in their cas

Re: [Rd] dist function in R is very slow

2017-06-17 Thread Moshe Olshansky via R-devel
of magnitude faster than dist). From: Stefan Evert To: Moshe Olshansky Cc: R-devel Mailing List Sent: Sunday, 18 June 2017, 2:33 Subject: Re: [Rd] dist function in R is very slow > On 17 Jun 2017, at 08:47, Moshe Olshansky via R-devel > wrote: > > I am visualising h

[Rd] dist function in R is very slow

2017-06-17 Thread Moshe Olshansky via R-devel
Dear R developers, I am visualising high dimensional genomic data and for this purpose I need to compute pairwise distances between many points in a high-dimensional space (say I have a matrix of 5,000 rows and 20,000 columns, so the result is a 5,000x5,000 matrix or it's upper diagonal).Computi