Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-18 Thread Dan Tenenbaum
- Original Message - > From: "Gábor Csárdi" > To: "Simon Urbanek" > Cc: r-devel@r-project.org > Sent: Thursday, April 17, 2014 6:52:33 PM > Subject: Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary > > On Thu, Apr 17, 2014 at 9:43 PM,

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Simon Urbanek
On Apr 17, 2014, at 10:37 PM, Gábor Csárdi wrote: > On Thu, Apr 17, 2014 at 10:24 PM, Simon Urbanek > wrote: > [...] >> :) Let's try to make this simple. What can I do to make igraph available for >> OSX users? I guess this is clear, I can make all examples that load >> suggested packages opt

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Gábor Csárdi
On Thu, Apr 17, 2014 at 10:24 PM, Simon Urbanek wrote: [...] > :) Let's try to make this simple. What can I do to make igraph available > for OSX users? I guess this is clear, I can make all examples that load > suggested packages optional. > > > Yes, I think that would be a good idea if you real

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Simon Urbanek
On Apr 17, 2014, at 10:14 PM, Gábor Csárdi wrote: > On Thu, Apr 17, 2014 at 10:08 PM, Simon Urbanek > wrote: > [...] > > So this effectively means that if I Import/Depend/Suggest etc. a BioC > > package in igraph, then igraph will likely not be available for OSX. Right? > > > > No. > > :) Le

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Gábor Csárdi
On Thu, Apr 17, 2014 at 10:08 PM, Simon Urbanek wrote: [...] > > So this effectively means that if I Import/Depend/Suggest etc. a BioC > package in igraph, then igraph will likely not be available for OSX. Right? > > > > No. > :) Let's try to make this simple. What can I do to make igraph availa

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Simon Urbanek
On Apr 17, 2014, at 9:52 PM, Gábor Csárdi wrote: > On Thu, Apr 17, 2014 at 9:43 PM, Simon Urbanek > wrote: > [...] > The Suggests failure has nothing to do with BioC. Only packages listed in > Depends/Imports are required for a package to work so there is no guarantee > for any packages in Su

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Gábor Csárdi
On Thu, Apr 17, 2014 at 9:43 PM, Simon Urbanek wrote: [...] > The Suggests failure has nothing to do with BioC. Only packages listed in > Depends/Imports are required for a package to work so there is no guarantee > for any packages in Suggests to be available - hence the package should not > brea

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Simon Urbanek
On Apr 17, 2014, at 9:24 PM, Gábor Csárdi wrote: > On Thu, Apr 17, 2014 at 9:07 PM, Simon Urbanek > wrote: > [...] > > No, the issue is that igraph suggests graph yet fails when it's not present. > It should guard against failure is case it's not available. I didn't look at > this particular

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Gábor Csárdi
On Thu, Apr 17, 2014 at 9:07 PM, Simon Urbanek wrote: [...] > > No, the issue is that igraph suggests graph yet fails when it's not > present. It should guard against failure is case it's not available. I > didn't look at this particular case, but sometimes that is necessary to > break infinite de

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Simon Urbanek
On Apr 17, 2014, at 7:42 PM, Gábor Csárdi wrote: > On Thu, Apr 17, 2014 at 5:18 PM, Simon Urbanek > wrote: > > On Apr 17, 2014, at 9:30 AM, Gábor Csárdi wrote: > > > Hi All, I am not sure why this happens, but apparently an old binary is > > installed by default. Downloading and installing

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Simon Urbanek
On Apr 17, 2014, at 6:31 PM, Gábor Csárdi wrote: > On Thu, Apr 17, 2014 at 5:18 PM, Simon Urbanek > wrote: > > On Apr 17, 2014, at 9:30 AM, Gábor Csárdi wrote: > > > Hi All, I am not sure why this happens, but apparently an old binary is > > installed by default. Downloading and installing t

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Dan Tenenbaum
- Original Message - > From: "Gábor Csárdi" > To: "Simon Urbanek" > Cc: r-devel@r-project.org > Sent: Thursday, April 17, 2014 4:42:50 PM > Subject: Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary > > On Thu, Apr 17, 2014 at 5:18 PM, Si

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Gábor Csárdi
On Thu, Apr 17, 2014 at 5:18 PM, Simon Urbanek wrote: > > On Apr 17, 2014, at 9:30 AM, Gábor Csárdi wrote: > > > Hi All, I am not sure why this happens, but apparently an old binary is > > installed by default. Downloading and installing the new binary by hand > > works fine. > > > > I think yo

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Gábor Csárdi
On Thu, Apr 17, 2014 at 5:18 PM, Simon Urbanek wrote: > > On Apr 17, 2014, at 9:30 AM, Gábor Csárdi wrote: > > > Hi All, I am not sure why this happens, but apparently an old binary is > > installed by default. Downloading and installing the new binary by hand > > works fine. > > > > I think yo

Re: [Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Simon Urbanek
On Apr 17, 2014, at 9:30 AM, Gábor Csárdi wrote: > Hi All, I am not sure why this happens, but apparently an old binary is > installed by default. Downloading and installing the new binary by hand > works fine. > I think you may be misinterpreting - the is no binary for igraph 0.7 because it

[Rd] R-3.1.0 OSX Snow Leopard installs old binary

2014-04-17 Thread Gábor Csárdi
Hi All, I am not sure why this happens, but apparently an old binary is installed by default. Downloading and installing the new binary by hand works fine. Is this the intended behavior? If yes, may I ask what is the reason for it? Thanks, Gabor > install.packages("igraph") There is a binary v