[Rd] R-devel/R-patched crossed with Xterm/IDLE

2003-02-26 Thread Jan de Leeuw
Two versions of R 1. R-patched (compiled with X11 support, and tcl/tk for X11) 2. R-devel (compiled with native tcl/tk support, without-x) UI's 1. Terminal.app (or an Xterm) with an X server running. 2. IDLE (i.e. native Python GUI with native tkinter) with Rpy loaded. No X server. Packag

[Rd] unwanted coercion of length 0 vectors (PR#2587)

2003-02-26 Thread Mark . Bravington
When something is assigned to an element of a vector that was previously of length 0, the vector is coerced to the mode of the something, regardless of whether the coercion is necessary under normal R rules. In particular, if NA is assigned to an element of a vector that was previously length 0, t

[Rd] bundle-loader

2003-02-26 Thread Jan de Leeuw
I removed "-bundle_loader $(Rexecbin)/R.bin" from the configure files but left "-undefined error". Now 1. Everything builds fine, i.e. the packages get their symbols from libR.dylib just fine. This is libR.dylib in the build directory, but I think dyld is smart enough to find it in the install

[Rd] nice combo on os x

2003-02-26 Thread Jan de Leeuw
You need (a) a recent OS X framework build of python, which also installs IDLE (b) a recent OS X framework build of AquaTk (i.e. native Tcl/Tk) (c) a version of R compiled with AquaTk and without X11 (d) a recent version of Rpy Now you can open IDLE and say >> from rpy import * >> r.quartz() >>

[Rd] Alias does not label rows and columns correctly. (PR#2586)

2003-02-26 Thread dsmith
Alias does not label rows and columns correctly. Instead of labeling the rows with the removed predictors, and the cols with the included predictors; instead, it labels the columns with the first r predictors (where r is the rank of the matrix) and the rows with the remaining predictors. Here's

Re: [Rd] [Package car/data.ellipse]: confidence intervals off by factor sqrt(2)??? (PR#2584)

2003-02-26 Thread Volker Franz
Hi John and Deepayan, ok, I got your points and agree. You are right --- and I am sorry for being too fast in sending this report. Thank you for the help!!! Volker -- __ [EMAIL PROTECTED] mailing list http://www.stat.math.ethz.ch/mailman/listinfo/r-de

Re: [Rd] [Package car/data.ellipse]: confidence intervals off by factor sqrt(2)??? (PR#2584)

2003-02-26 Thread John Fox
Dear Volker, At 11:23 PM 2/26/2003 +0100, Volker Franz wrote: Hi John, > "JF" == John Fox <[EMAIL PROTECTED]> writes: JF> Dear Volker, If the data ellipse (or, in this case, circle) is JF> scaled so that its shadows (projections) on the axes each JF> includes 68% of the data (that

Re: [Rd] [Package car/data.ellipse]: confidence intervals off by factor sqrt(2)??? (PR#2584)

2003-02-26 Thread Deepayan Sarkar
On Wednesday 26 February 2003 04:23 pm, Volker Franz wrote: > Hi John, > > > "JF" == John Fox <[EMAIL PROTECTED]> writes: > > JF> Dear Volker, If the data ellipse (or, in this case, circle) is > JF> scaled so that its shadows (projections) on the axes each > JF> includes 68% of the

Re: [Rd] [Package car/data.ellipse]: confidence intervals off by factor sqrt(2)??? (PR#2584)

2003-02-26 Thread Volker Franz
Hi John, > "JF" == John Fox <[EMAIL PROTECTED]> writes: JF> Dear Volker, If the data ellipse (or, in this case, circle) is JF> scaled so that its shadows (projections) on the axes each JF> includes 68% of the data (that is of the marginal distribution JF> of each variable), th

Re: [Rd] [Package car/data.ellipse]: confidence intervals off by factor sqrt(2)??? (PR#2584)

2003-02-26 Thread John Fox
Dear Volker, If the data ellipse (or, in this case, circle) is scaled so that its shadows (projections) on the axes each includes 68% of the data (that is of the marginal distribution of each variable), then the ellipse will include less than 68% of the data (i.e., of the joint distribution of

[Rd] [Package car/data.ellipse]: confidence intervals off by factor sqrt(2)??? (PR#2584)

2003-02-26 Thread volker . franz
Full_Name: Volker Franz Version: Version 1.6.2 (2003-01-10) OS: Debian Submission from: (NULL) (192.124.28.104) Hi there, it seems to me that data.ellipse of package "car" (Version 1.0-1) produces confidence interval's which are too big. To see this, do: library(car) plot(c(-2,2),c(-2,2),pch=

Re: [Rd] class(x) <- error

2003-02-26 Thread John Chambers
The original report was correct. I fixed the problem & had sent a message to r-devel to that effect, but we may have been having delays or other problems with our mailer. Thanks again for the report, Paul. John Chambers Ross Ihaka wrote: > > Paul Gilbert wrote: > > I think this is an error in

Re: [Rd] class(x) <- error

2003-02-26 Thread Ross Ihaka
Paul Gilbert wrote: I think this is an error in r-devel: R : Copyright 2003, The R Development Core Team Version 1.7.0 Under development (unstable) (2003-02-25) ... > x <- matrix(1:9,3,3) > class(x)<-c("a", "matrix") > class(x) [1] "a" "matrix" > class(x)<-class(x)[-1] > class(x) [1] "a"

Re: [Rd] R-devel problems

2003-02-26 Thread Jan de Leeuw
Number 3 below is fixed. Number 5 is a bootstrap problem, which could be solved perhaps with make bin; make install bin; make install modules packages or by doing a real two stage build. But I agree that is a major change in the build process. This can also be hacked by doing a make install, wait

Re: [Rd] POSIX problem in New Zealand (PR#2570)

2003-02-26 Thread ripley
We can't reproduce the `bug' on an XP machine in the NZ timezone! Indeed, there is no bug in the output you present, just different time zones. I did find a bug in the code which gave me different answers from you, and fixed it in R-devel. Please take a look at the current R-devel snapshot and

Re: [Rd] R-devel problems

2003-02-26 Thread Kurt Hornik
> Jan de Leeuw writes: > The OS X configure in R-devel has been changed to use two-level > namespaces. There are still some problems. > 3. Configure does not pass the $(Rexecbindir) to the Makefiles in the > /src/library directory, so the links cannot find the bundle_loader. I > added them by