Hi,
R CMD check is causing some "make sure it passes check, [EMAIL PROTECTED]@%% !!
- I *did* check it passes check #$%#$!5 !!!" disagrement...
I currently have two versions of the same package... one goes through
the check, the other does not.
bin/R CMD check ~/these/R/affy --library=${HOME}/myRlib
does while
bin/R CMD check ~/these/R/affy-taniwha/affy --library=${HOME}/myRlib
does not
> diff -r --brief ~/these/R/affy-taniwha/affy/R ~/these/R/affy/R | grep -v '~$' | grep
> -v CVS
Only in /home/laurent/these/R/affy-taniwha/affy/R: bg.Affy.chipwide.R_back
Only in /home/laurent/these/R/affy-taniwha/affy/R: express.R_back
Only in /home/laurent/these/R/affy-taniwha/affy/R: normalize.qspline.R_back
Only in /home/laurent/these/R/affy/R: pairs.AffyBatch.R_exp
Only in /home/laurent/these/R/affy-taniwha/affy/R: read.affybatch.R_back
Only in /home/laurent/these/R/affy-taniwha/affy/R: rma.R_back
>
Any hint ?
L.
PS: the ouput of R check when failing is:
* checking R files for syntax errors ... OK
* checking R files for library.dynam ... OK
* checking generic/method consistency ... WARNING
Error in .loadPackageQuietly(package, lib.loc) :
Error in .Last.lib(libpath) : Target of assignment expands to non-language
object
Execution halted
* checking for assignment functions with final arg not named 'value' ... WARNING
Error in .loadPackageQuietly(package, lib.loc) :
Error in .Last.lib(libpath) : Target of assignment expands to non-language
object
Execution halted
* checking Rd files ... OK
* checking for undocumented objects ... ERROR
Error in .loadPackageQuietly(package, lib.loc) :
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