Hi Petr, yes the function basically consists on merging two time series with
different time intervals: one regular 'GPS' and one irregular 'xact' (the
latter containing the binomial variable 'wd' that I want to add to 'GPS'.
Apparently my attachments did not go through. Here you have the dputs yo
Hi
you did not provide enough info for resolving your error (at least not enough
for myself).
How did you call abline?
Standard way of calling abline is:
fit <- lm(...)
abline(fit)
So please provide code you used, R version maybe OS and probably some data to
play with.
Regards
Petr
>
Thanks for the replies from Peter Langfelder and Ranjan Maitra.
I tried su, "yum install R-core". That installed R 3.0.1. To
install packages like zoo and RCurl, I had to install other software,
but with the help of a friend, Google, and previous replies to similar
questions on R
Great thank you - are there any resources that step through how to use
RTools to compile the
source package and install it in R on (64-bit windows) ?
>>> Berend Hasselman 8/07/2013 6:38 pm >>>
On 08-07-2013, at 02:15, "Lucy Leigh"
wrote:
> Hi,
> I have a source package that isn't available as
On Jul 8, 2013, at 2:14 PM, Bert Gunter wrote:
> David:
>
> Perhaps not. func() must be vectorized for this to work.
>
> -- Bert
>
>
> On Mon, Jul 8, 2013 at 2:06 PM, David Carlson wrote:
>> ?outer
>>
>> e.g. output <- outer(ap, am, func)
>>
>> -
>> Davi
I have an R package, cladoRcpp, which is up on CRAN. After
a minor update, which compiled without errors on R CMD check
on my machine, I submitted the update.
Brian Ripley got an error that I didn't get:
==
We still see
> Rcpp_
David:
Perhaps not. func() must be vectorized for this to work.
-- Bert
On Mon, Jul 8, 2013 at 2:06 PM, David Carlson wrote:
> ?outer
>
> e.g. output <- outer(ap, am, func)
>
> -
> David L Carlson
> Associate Professor of Anthropology
> Texas A&M University
?outer
e.g. output <- outer(ap, am, func)
-
David L Carlson
Associate Professor of Anthropology
Texas A&M University
College Station, TX 77840-4352
-Original Message-
From: r-help-boun...@r-project.org
[mailto:r-help-boun...@r-project.org] On Behalf Of
I'm new to R plotting, so please be gentle.
I want to make a large association plot, showing whether each combination
of variables averages more or less than the whole for proportion in a
certain category.
So, for example:
Dependent Variable: eye color (30% green, 45% brown, 25% blue on average)
Thank you for your help.
It seems like there was an issue with the libPath. The path is setup to
reference a cached copy of a shared drive and somehow the cache and the shared
drive were not synching. I finally located the real place (i.e. the cached
area) where R was looking and manually remove
On Jul 8, 2013, at 10:21 AM, Pooya Lalehzari wrote:
> Hello,
> Some how, my xts/zoo package ran into trouble. I tried to re-install the
> packages, I get an error that it cannot remove the prior installation.
> I uninstalled R and the deleted all the libraries and reinstalled everything
> fresh
R -
I would like to construct a matrix from the output of a loop that has 2
values it varies over the course of the loop creating a 20x20 matrix of
output values:
ap = logspace(-3, 0, 20)
am = logspace(-3, .7, 20)
for (ap in apList)
{
for (am in amList)
{
output = func(ap, am)
}
}
PLEASE do read the posting guide
http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
First read the instructions for posting. You gave us no data, no
code, no example. Just an error message out of context.
1. It's a summary **object**, not a file.
2. ?summary.glm
3. Read "An Introduction to R" and ?"[" to learn how to work with
lists and extraction functions, which are essential.
4. Also
methods(print)
stats:::print.summary.glm ## for code of how object is printed
Cheers,
Bert
On Mon, Jul 8,
On 08/07/2013 20:20, Witold E Wolski wrote:
While developing a package I would like to disable vignette creation
when executing R CMD build. The vignette creation is costly so I would
prefer not to have to regenerate it every time.
Why not read the documentation?
As the exact answer depends on
Try
names(summary (plasma_glm_1))
You can extract named components individually, just as you would for
any other R object.
Sarah
On Mon, Jul 8, 2013 at 7:57 AM, Hermann Norpois wrote:
> Hello,
>
> how can I retrieve electively data from a summary file, for instance I
> would like to get the Pr
Dear whom it may concerns,
I am Jia Xu, a summer intern analyst at Citi Research. I am also a graduate
student studying Financial Engineering at Cornell. I am running regression
analysis with Rstudio now. I have been experiencing difficulty with the abline
function. No matter I call it directly
Hello,
how can I retrieve electively data from a summary file, for instance I
would like to get the Pr of Coefficients
Thanks
> summary (plasma_glm_1)
Call:
glm(formula = ESR ~ fibrinogen, family = binomial(), data = plasma)
Deviance Residuals:
Min 1Q Median 3Q Max
-0.9298
Dear R Developers,
I have two doubts related to R
1. i try to install R package 3.0 in my linux system ./configure.
it gives Error as
configure: error: --with-readline=yes (default) and headers/libs are not
available
2. This is related to library
i am trying to install the library(cummeRbund) in
Hello R-help
Does anyone know if there is a package for global fit analysis and if so how to
use it. I am trying to calculate the Kd value of a protein interacting with
its ligand (When protein interacts with ligand this effect a number of
residues). The table below shows with increasing conc
While developing a package I would like to disable vignette creation
when executing R CMD build. The vignette creation is costly so I would
prefer not to have to regenerate it every time.
regards
--
Witold Eryk Wolski
[[alternative HTML version deleted]]
__
Hi Arun,
I think that my data has another format. When I type the comand dput(time), it
appears the following information:
structure(list(date = structure(c(696L, 18L, 19L, 43L, 44L, 45L,
67L, 68L, 94L, 95L, 117L, 118L, 141L, 142L, 167L, 168L, 193L...), .Label =
c("01/01/2011 12:32", "01/02
Hi all,
I'm a newbie to R and I can't figure out how to fix this error I keep getting
in R-studio:
> "error setting certificate verify locations:\n CAfile: \n CApath: none\n"
Error in twInterfaceObj$doAPICall(cmd,params,"GET",...) :
Error: error setting certificate verify locations:
CAfile:
CAp
Hello everyone.
I am doing a logistic gam (package mgcv) on a pretty large dataframe
(130.000 cases with 100 variables).
Because of that, the gam is fitted on a random subset of 1. Now when I
want to predict the values for the rest of the data, I get the following
error:
> gam.basis_al
The call to all.names() below probably should have the unique=TRUE argument.
It doesn't make any difference in this particular code, but having repeated
names
could cause problems in related code.
Bill Dunlap
Spotfire, TIBCO Software
wdunlap tibco.com
> -Original Message-
> From: r-help
Your cart is stuck in front of your horse. This will be WAY easier to
accomplish if you rename your columns in your input data frame before fitting
the model.
---
Jeff NewmillerThe .
Try using all.names() to get all the names in the formula. E.g.,
f <- function (formula, minNameLength = 2, abbreviateFunctionNames = FALSE)
{
names <- all.names(formula, functions = abbreviateFunctionNames)
abbrNames <- lapply(abbreviate(names, minlength = minNameLength),
as.name
For an application, I need to get a character string representation of
the formula or
model call for glm objects, but also, for labeling output and plots, I
want to be able
to abbreviate the words (variables) in model terms. This requires some
formula
magic that I can't quite get, in particular
On 08/07/2013 18:21, Pooya Lalehzari wrote:
Hello,
Some how, my xts/zoo package ran into trouble. I tried to re-install the
packages, I get an error that it cannot remove the prior installation.
I uninstalled R and the deleted all the libraries and reinstalled everything fresh. It
still complai
> > Anyone know what the 95% confidence
> > interval of the median would be?
For an R answer you could get one for each group from wilcox.test( ,
conf.int =TRUE ) and build that into an alternative boxplot stats function
which you could specify in your bwplot call.
Steve Ellison
Hello,
Some how, my xts/zoo package ran into trouble. I tried to re-install the
packages, I get an error that it cannot remove the prior installation.
I uninstalled R and the deleted all the libraries and reinstalled everything
fresh. It still complains the same thing. I try to remove.packages("z
Thank you,
So my mistake was my data was a factor and not character,for strsplit
Thanks so much
-Original Message-
From: Rui Barradas [mailto:ruipbarra...@sapo.pt]
Sent: 08 July 2013 15:55
To: Pancho Mulongeni
Cc: r-help@r-project.org
Subject: Re: [R] Splitting coordinates into two
Hell
Hello,
Try the following
x <- structure(...)
sp <- strsplit(as.character(x), ",")
G1 <- sapply(sp, `[`, 1)
G2 <- sapply(sp, `[`, 2)
Hope this helps,
Rui Barradas
Em 08-07-2013 14:49, Pancho Mulongeni escreveu:
Hi users,
I have a simple vector of five coordinates in form of ('lat1,
long1'
--- most of the message deleted
Performing exactly the same routine with the same data on a logistic
model with family=binomial does not give this error message.
So my question is, what am I missing here?
Thanks, for any possible input
I'm not a user of multcomp, so will follo
if anyone was interested
ggplot(xmelt, aes(x=factor(Var1),value, row=L1, col=Var2, group=Var2,
fill=factor(Var1))) +
geom_bar(stat="identity")+ facet_grid(Var2~L1, scale="free") +
xlab("Maturities") + ylab("Basis Points Move") + theme(legend.position =
"none") +
scale_fill_grey(start=0.8,end=0.3
Hi,
vec1<- structure(c(.
vec1
#[1] -22.576608,17.07859 -24.621739,17.959728 -26.567955,18.134651
#[4] -22.832516,17.183304 -21.980459,16.91328
#43 Levels: -17.394217,15.886574 -17.406994,14.393463 ... -28.017742,18.745594
G1<-sapply(strsplit(as.character(vec1),","),`[`,1)
G2<-sapply(strsp
Hi users,
I have a simple vector of five coordinates in form of ('lat1,
long1','lat2,long2',...,'latn,longn')
And I would like to create two vectors, one just with the first coordinate
G1<-c('lat1,'lat2',..,'latn')
G2<-c('long1,'long2',...,'longn')
I am trying to apply strsplit(x=g,split=',') on
Hello Folks,
I have an other problem with ggplot2. This is what I got so far.
levels(xmelt$Var2) <- c("Outright", "Market Move Adjusted")
ggplot(xmelt, aes(x=factor(Var1),value, row=L1, col=Var2, group=Var2)) +
geom_bar(stat="identity") + facet_grid(Var2~L1, scale="free") +
xlab("Maturities")
It seems to me that the most straightforward approach would be to pool the b
coefficients directly. I assume you used some kind of mixed-effects logistic
model to analyze those data for each study with random effects for subjects and
a dummy variable for treatment (besides possibly some other co
Hi
It seems to me, that you basically want merge, but I can miss the point. Try
post
dput(head(xact))
dput(head(GPS))
and what shall be desired result based on those 2 datasets.
Regards
Petr
> -Original Message-
> From: r-help-boun...@r-project.org [mailto:r-help-bounces@r-
> project
On 08/07/2013 01:15, Lucy Leigh wrote:
Hi,
I have a source package that isn't available as a windows zip file. Can
anyone explain to me how I can install this on my windows R platform?
I am surprised that is all you saw, but running
Rcmd INSTALL PReMiuM_3.0.21.tar.gz
at a shell command line s
On 08-07-2013, at 02:15, "Lucy Leigh" wrote:
> Hi,
> I have a source package that isn't available as a windows zip file. Can
> anyone explain to me how I can install this on my windows R platform?
> When I use the following code:
> install.packages("PReMiuM_3.0.21.tar.gz", type = "source")
>
have you checked the bit version !?
Which R do you use? 32 or 64 bit?
---
- László-András Zsurzsa, -
- Msc. Infromatics, Technical University Munich, -
---
Hi,
I have a source package that isn't available as a windows zip file. Can
anyone explain to me how I can install this on my windows R platform?
When I use the following code:
install.packages("PReMiuM_3.0.21.tar.gz", type = "source")
I get this error message:
* installing *source* packa
Dear Michael and other readers,
Please see below for my answers to your questions about my data.
On 07/06/2013 02:56 PM, Michael Dewey wrote:
[..]
Because everything was randomized, I can only calculate the total
number of times a certain response was used under each type of trial.
There is no
Hello!
For the first question, here is an example:
> E <- alltypes(bramblecanes, Kest, nsim = 100, envelope =
+ TRUE,savepatterns=TRUE,correction="isotropic")
> E$fns[[1]]$r
> E$fns[[1]]$obs
From: r-sig-geo-boun...@r-project.org [r-sig-geo-boun...@r-proj
Dear Community,
I hope that some of you are a bit experienced with the R package ChoiceModelR
by Sermas and Colias, to estimate a Hierarchical Bayes Multinomial Logit Model.
Actually, I am quite a newbie on both R and Hierarchical Bayes. However, I
tried to get some estimates by using the scrip
strsplit(x, split= " ")
2013/7/3 Dan Murphy
> I have a vector of strings that contain mathematical expressions. E.g.,
> x <- c("5 <= 7", "z = 1+2")
> and I would like to decompose each expression into its left- and
> right-hand-side components etc., output something like
>
> "5" "<=" "7"
> "z"
Please ask follow-up questions about Bioconductor packages on the Bioconductor
mailing list.
http://bioconductor.org/help/mailing-list/mailform/
If you are interested in organisms rather than chips, use the organism package,
e.g., for Homo sapiens
library(org.Hs.eg.db)
df0 = select(org.H
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