[R] install R-devel from R 3.1 to R 3.2 kubuntu

Dear all, I found some threads about compiling r-devel source and installing process but I need some clarifications. 1. Is it better to uninstall R 3.1 before installing R-devel? 2. I have multiples library directories, R-devel will use these libpaths? .libpaths() [1]

Re: [R] Special case of data classification

Have you done any homework for yourself? CRAN task views would be an obvious first place to look: http://cran.r-project.org/web/views/ Both the environmental and spatio-temporal views seem like possibilities. If that doesn't suit, try searching on suitable keywords Cheers, Bert Bert Gunter

[R] Alpha not working in geom_rect

Hi I am trying to activate the alpha argument to work, but for some reason it does not to play with me. Anybody has an idea why? p - ggplot(data = prediction_df, aes(x=x, y=prediction, fill=threshold)) + geom_area(colour=black, size=.2, alpha=.4) + scale_fill_brewer(palette=Set1,

Re: [R] Confidence Intervals for survreg (survival)

On Mar 7, 2015, at 6:29 AM, annclaire wrote: Hello! I am trying to fit confidence intervals for my server object as well, but I can only get an interval estimation for the intercept coefficient and am getting NAs for my scale parameter. Did you also have this issue? Below is a rough

Re: [R] Confidence Intervals for survreg (survival)

Hello! I am trying to fit confidence intervals for my server object as well, but I can only get an interval estimation for the intercept coefficient and am getting NAs for my scale parameter. Did you also have this issue? Below is a rough outline of my code newsurvobj -Surv(studytimenew,

[R] t-test: many changing groups.

I'd like to perform a t-test between groups 'A' and 'B'. The difficulty is that although there is only one response variable, there are many observations, and the grouping (A or B) differs with each observation. My code for generating the input data is shown below. I'd like to know how to

[R] Special case of data classification

I have a matrix with dissimilarity coefficients for bird community composition in different monthes. I need to divide this variants of bird communities in several classes (seasonal aspects). Each class must include variants maximally similar with each other and maximally dissimilar with other

[R] Merge List element by name

Hi, I have a list like below :  gg [[1]]       assembly1 GCA_000257985 [[2]]       assembly1 GCA_17125 [[3]]       assembly1 GCA_16805 [[4]]       assembly1 GCA_000144955 [[5]]       assembly                    isolation.source1 GCA_000507725          missing [[6]]       assembly

Re: [R] How to see a R function's code

Hi there, I know this is quite an old post but I am wondering if the answer still applies!? I would like to access the boxplot function. So, I tried to follow the instruction of Uwe Ligges’s article “Accessing the Sources” http://cran.r-project.org/doc/Rnews/Rnews_2006-4.pdf . However, in

Re: [R] How to see a R function's code

Most (perhaps all) packages are byte-compiled now. You can often see decompiled code by entering the name of the function without parentheses, or using the getAnywhere function. For base R functions you should probably download the R source tar file separately and unpack it to a convenient

Re: [R] Merge List element by name

This would be a perfect time for you to use best practices to convey what you have to us [1]... most specifically, posting using plain text will keep your code from getting munged up, and using dput to provide an unambiguous form we can put into our R sessions. [1]

Re: [R] Alpha not working in geom_rect

Hi Adel, Almost certainly because the device you were using doesn't support transparency.Try it with a PDF device and check the resulting file in a PDF reader: pdf(ad.pdf) print(p) dev.off() Jim On Sun, Mar 8, 2015 at 4:39 AM, Adel adel.da...@socav.gu.se wrote: Hi I am trying to activate