Hi,
I run a statistical test function in the package fUnitRoots that
returns a S4 object but I am wondering how to extract the p-value, one of
the output elements.
The document of the function urdfTest:
.
All tests return an object of class fHTEST with the following slots:
@call
.
The key to your problem may be that
x-apply(missing,1,genRows)
converts 'missing' to a matrix, with the same type for all columns
then makes x either a list or a matrix but never a data.frame.
Those features of apply may mess up the rest of your calculations.
Don't use apply().
Bill Dunlap
On 11 Mar 2015, at 23:41 , Erich Neuwirth erich.neuwi...@univie.ac.at wrote:
OSX 10.10.2
R 3.1.3
XQuartz installed.
I am trying to run one of the tcltk demos
Which demos? Doesn't look like any the ones in the package.
(Please at least be specific when you imply that someone is
Hi,
I'm trying to extract sequences from my data, using the SPADE algorithm in
the arulesSequences package:
1 1 8 1100 31 45 31 45 1 5 1200
1 2 100 1100 31 45 1 5 31
1 3 59 1100 31 45 1 81 1000 1 1 5
1 4 69 1100 31 45 17 1000 610 1000 1 1 81
1 5 31 1100 31 45 81 1000
(library(Matrix
Hi,
I'm trying to extract sequences from my data, using the SPADE algorithm in
the arulesSequences package:
1 1 8 1100 31 45 31 45 1 5 1200
1 2 100 1100 31 45 1 5 31
1 3 59 1100 31 45 1 81 1000 1 1 5
1 4 69 1100 31 45 17 1000 610 1000 1 1 81
1 5 31 1100 31 45 81 1000
(library(Matrix
Sarah,
This strategy works great for this small dataset, but when I attempt your
method with my data set I reach the maximum allowable memory allocation and
the operation just stalls and then stops completely before it is finished.
Do you know of a way around this?
Thanks
On Tue, Mar 10, 2015
Thesw are demos for
tclscrollbar
I copied them from the help file to the console manually
as the help file suggested.
On 12 Mar 2015, at 09:04, peter dalgaard pda...@gmail.com wrote:
On 11 Mar 2015, at 23:41 , Erich Neuwirth erich.neuwi...@univie.ac.at
mailto:erich.neuwi...@univie.ac.at
This is a fairly long question. It's about a problem that's easy to
specify in terms of sets, but that I found hard to solve in R by using
them, because of the strange design of R data structures. In explaining
it, I'm going to touch on the reshape2 library, dcast, sets, and the
Well put. I avoid them too, and go so far as to seek and destroy so they
don't get loaded unnoticed and cause unwanted consequences.
.RData files (the ones with nothing before the period) are just traps
for your future self, with no documentation. I avoid them like the plague.
JN
On 15-03-11
Sorry,
I get at these demo when I do
?tkscrollbar
Then the help file for many of the UI widgets appears, titled
TkWidgets {tcltk}
On the bottom of this file are the 2 examples I mentioned.
Excuse the incomplete description in the first and the incorrect description in
the second message.
On
Hi,
Here same working example.
http://mcu.edu.tw/~chenmh/teaching/project/r/reference/RTclTkExamples/
Best,
Karim
On Wed, Mar 11, 2015 at 10:41 PM, Erich Neuwirth
erich.neuwi...@univie.ac.at wrote:
OSX 10.10.2
R 3.1.3
XQuartz installed.
I am trying to run one of the tcltk demos
This one
Fixed in R-devel.
As a curiosity, this seems to have been there the last 7 years without anyone
noticing. And the change to tcl() is another 4.5 years older...
The problem with \dontrun sections in examples is that they tend not to be
run...
-pd
On 12 Mar 2015, at 09:17 , Erich Neuwirth
%/% which, BTW,
violated the sacred rule that for all a, and non-zero b:
a = b * (a %/% b) + a %% b
Namely, that Inf %/% n is not Inf, but NaN.
But the other sacred rule is that a%%b is =0 and b.
By the way, you will run into problems with %% long before Inf. E.g.,
(1 + 2^53) %% 2 # 1
On Wed, Mar 11, 2015 at 09:00:15AM -0400, Prof J C Nash (U30A) wrote:
Well put. I avoid them too, and go so far as to seek and destroy so they
don't get loaded unnoticed and cause unwanted consequences.
.RData files (the ones with nothing before the period) are just traps
for your future
The merge function combines 2, not 3 files at a time. Maybe
rich.stats2 = merge(rich.stats, Month, by=X.SampleID)
rich.stats3 = merge(rich.stats2, Location, by=X.SampleID)
Reading the manual page will help:
?merge
-
David L Carlson
Department of Anthropology
I’m seeking to design a MaxDiff experiment that will have a number of blocks of
this type:
Which of these items is the
most important?
Which of these items is the
least important?
Item 1
Item 2
Item 3
Item 4
I’m seeking to use the choiceDes package
Most of this question is over my head, I'm afraid, but looking at what
I think is the crux of your question, couldn't you achieve the results
you want in two steps, like this:
dta - data.frame(ID=c(1,1,1,1,2,2,3,3,3,3),
Day=c(1,2,4,7,2,3,1,3,4,8),Pain=c(10,9,7,2,8,7,10,6,6,2))
l1 -
Hola,
Esto lo hice algún tiempo para no hacer tan pesado los dibujos, si buscar
por R simplify shp encuentras cosas, por ejemplo:
http://the-praise-of-insects.blogspot.com.es/2011/04/simplifying-polygon-shapefiles-in-r.html
Hola de nuevo.
He dado con la solución y la comparto. El tema es que hay que compilar
el documento usando knit2html(fichero.Rmd) desde consola en vez de
usar el botón KnitHTML que aparece en RStudio.
___
R-help-es mailing list
On 11 Mar 2015, at 20:05 , MacQueen, Don macque...@llnl.gov wrote:
What is the result of
capabilities()['tcltk']
?
- and did the configure actually succeed, tcl-wise? Should be near the end of
the output in, like
Interfaces supported: X11, aqua, tcltk
Also notice that if
Estimado José Luis
¿Será un error en RStudio? ¿O alguna configuración? La verdad que casi
nunca uso KnitHtml.
Javier Marcuzzi
El 12 de marzo de 2015, 7:58, Jose Luis Cañadas Reche
canadasre...@gmail.com escribió:
Hola de nuevo.
He dado con la solución y la comparto. El tema es que hay
Estimados colegas,
Soy nuevo en uso de R. Requiero por ello amablemente de su ayuda. Estoy
realizando una captación de datos de una página web html de comentarios
turísticos relativos a 10 hoteles. El código que parcialmente empleo es
el siguiente:
(...)
for (i in seq_len(10)){
txt -
In base R you can do what I think you want with aggregate() and Filter().
E.g.,
a - aggregate(df[Day], df[ID], function(x)x)
str(a)
'data.frame': 3 obs. of 2 variables:
$ ID : num 1 2 3
$ Day:List of 3
..$ 1: num 1 2 4 7
..$ 5: num 2 3
..$ 7: num 1 3 4 8
i14 -
Dear Johan
From GENOMETRA we organize this kind of courses on demand
In a couple of weeks we are running one in Valencia:
http://www.genometra.com/cursos/curso_r_2015_03/
Sorry that in this case the program is in Spanish.
If your can find a group of people interested on the course we can go
Hi
-Original Message-
From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Jan Kim
Sent: Wednesday, March 11, 2015 4:44 PM
To: r-help@r-project.org
Subject: Re: [R] .Rdata files -- fortune?
On Wed, Mar 11, 2015 at 09:00:15AM -0400, Prof J C Nash (U30A) wrote:
Well put.
Dear R Users,
I am pleased to inform you that my clifro package has been submitted to
CRAN today:
http://cran.r-project.org/web/packages/clifro/
The clifro package imports data from New Zealand's National Climate
Database (via CliFlo) and provides generic plotting methods for a range of
the
How BLAS and LAPACK are related, does R need both?
I am trying to understsand different BLAS options in R and I am quite not
sure if LAPACK is part of BLAS, or separate library or something else.
Based on http://www.netlib.org/lapack/ it looks like LAPACK is some kind of
BLAS extension (LAPACK
Thank you very much.
Could we extract the p-value in the output of the ur.df function? Does
there exist any unit root test function where the p-value can be extracted?
Thanks!
An example for ur.df function:
data(Raotbl3)
attach(Raotbl3)
lc.df - ur.df(y=lc, lags=3, type='trend')
summary(lc.df)
On Mar 12, 2015, at 7:49 PM, jpm miao wrote:
Thank you very much.
Could we extract the p-value in the output of the ur.df function? Does there
exist any unit root test function where the p-value can be extracted? Thanks!
If this were an S3 function, it would be a fairly simple operation
Sorry. Let me modify the question: Does there exist any unit root test
function (with trend or intercept) where the p-value can be extracted? The
function adf.test in tseries package does return the p-value, but there's
no choice of trend or intercept. Thanks.
2015-03-13 10:49 GMT+08:00 jpm miao
Harold,
This did the trick for my application,
options(httr_oauth_cache=TRUE)
See
http://stackoverflow.com/questions/28221405/automated-httr-authentication-with-twitter-provide-response-to-interactive-pro
for details.
Jean
On Thu, Mar 12, 2015 at 10:25 AM, Doran, Harold hdo...@air.org wrote:
Estimado Manuel Sánchez Franco
Cometió un pequeño error, me respondió solo a mí y no a la lista, ¿podría
enviar a todos?
Hay una librería nueva rvest, está genial pero no le comprendí algunas
partes del formulario. ¿Si intenta con esta? Otra Rselenium.
¿Que usa usted?
Javier Marcuzzi
El 12 de
Poke around the help files ( perhaps source code) for package:httr to see
how to set
options(httr_oauth_cache). E.g.,
help(package=httr, Token-class)
Bill Dunlap
TIBCO Software
wdunlap tibco.com
On Thu, Mar 12, 2015 at 8:25 AM, Doran, Harold hdo...@air.org wrote:
I’m dealing with an
On 12/03/2015 13:43, Tomáš Greif wrote:
How BLAS and LAPACK are related, does R need both?
Both.
I am trying to understsand different BLAS options in R and I am quite not
sure if LAPACK is part of BLAS, or separate library or something else.
Based on http://www.netlib.org/lapack/ it looks
I�m dealing with an issue that is seemingly simple, and I�m sure there is an
obvious solution. I�m writing a wrapper function that calls functions from
another package (twitteR).
However, the function I happen to be using in that package prompts the user the
user to enter a �1� or a �2� in the
Estimado Manuel J. Sánchez Franco
No hace mucho estoy realizando algunas cosas muy semejantes a las que usted
describe. Básicamente use tres librerías, diría que cada una tiene un punto
fuerte sobre las otras. Pero hay dos puntos que están casi sobre R, el
primero es si usted automatiza a partir
Hello,
I am stuck trying to run an analysis using the package picante. I am
running two very similar analyses. One works as expected, but when I try
the other, I get the error:
Error in data.frame(PD = PDs, SR = SR) :
arguments imply differing number of rows: 34, 35
This is strange to me
Dear Petr, dear All,
On Thu, Mar 12, 2015 at 06:38:40AM +, PIKAL Petr wrote:
Hi
-Original Message-
From: R-help [mailto:r-help-boun...@r-project.org] On Behalf Of Jan Kim
Sent: Wednesday, March 11, 2015 4:44 PM
To: r-help@r-project.org
Subject: Re: [R] .Rdata files --
On Mar 12, 2015, at 1:04 AM, jpm miao wrote:
Hi,
I run a statistical test function in the package fUnitRoots that
returns a S4 object but I am wondering how to extract the p-value, one of
the output elements.
The document of the function urdfTest:
.
All tests return an object of
Hello,
I've found the following useful functionality:
s - 'cola,colb\n1,2\n2,3\n'
read.csv(text=s)
cola colb
112
223
But I haven't found a similar option in write.csv. I.e. I would like to
write a dataframe to a string. What would be the easiest way to go
about such a
Gracias Carlos, Olivier y Javier, ahora todo va mejor :)
Saludos, Eric.
2015-03-12 11:25 GMT-03:00 Javier Marcuzzi javier.ruben.marcu...@gmail.com
:
Estinado Eric
Ni idea de donde estaba el pdf que le envío, lo vi estos últimos días por
otro asunto y lo guarde pero no lo leí. Espero que sea
On Mar 12, 2015, at 10:15 AM, Thomas Nyberg wrote:
Hello,
I've found the following useful functionality:
s - 'cola,colb\n1,2\n2,3\n'
read.csv(text=s)
cola colb
112
223
But I haven't found a similar option in write.csv. I.e. I would like to
write a dataframe to a
On 12/03/15 19:38, PIKAL Petr wrote:
SNIP
On Wed, Mar 11, 2015 at 09:00:15AM -0400, Prof J C Nash (U30A) wrote:
SNIP
Personally I think that auto saving / restoring workspaces should be
reviewed, as it can, in practice, make it harder for people to render
their work in a self-contained and
Or, more in line with what was asked:
con - textConnection(foo, w)
write.csv(file=con, airquality)
close(con)
foo
It does, incidentally, look possible to equip write.table (of which write.csv
is a special case) with an intern=TRUE setting, which could effectively do the
above internally and
On 12 Mar 2015, at 21:39 , Axel Urbiz axel.ur...@gmail.com wrote:
Hello,
My apologies if this is not the right place to post this question.
The R-sig-Fedora list is rather more densely packed with people who know about
redhat/fedora.
I need to get R installed on a Linux Red Hat
I just wanted to send one final message out about this. My previous post
technically works, but is quite slow with large files/strings. I've
decided instead to do it exactly in the way that I was trying to avoid.
So just to set the record straight, these are the functions I'm going to
be using
(Forgot to CC my response to the list...)
Thanks a lot this is exactly what I'm looking for! This is how I'll
probably use it...
a
cola colb
112
223
f - textConnection(s_a, w)
write.csv(a, f, row.names=F)
close(f)
# Next do something with s_a...though
I am doing some mixed effects modeling where we would like to test the
hypothesis that the dependent variable (Dependent.var) as a function of
time depends on the value of the covariate 6 months to a year earlier. The
difficulty is that not all subjects have measurements every 6 months (as
shown
On Mar 12, 2015, at 3:39 PM, Axel Urbiz axel.ur...@gmail.com wrote:
Hello,
My apologies if this is not the right place to post this question.
I need to get R installed on a Linux Red Hat server. I have very limited
exposure to R and would appreciate some basic guidance if you could
Use your package manager seems like a good place to start.
Googling install R redhat seems like another good starting point.
I think for RedHat you'll probably want the EPEL repo.
Sarah
On Thu, Mar 12, 2015 at 4:39 PM, Axel Urbiz axel.ur...@gmail.com wrote:
Hello,
My apologies if this is
I was positive I knew WTF I was doing until you set me straight, Rolf. ;-)
---
Jeff NewmillerThe . . Go Live...
DCN:jdnew...@dcn.davis.ca.usBasics: ##.#. ##.#. Live
Hello,
My apologies if this is not the right place to post this question.
I need to get R installed on a Linux Red Hat server. I have very limited
exposure to R and would appreciate some basic guidance if you could point
me to resources describing the process, requirements, etc.
Thank you in
How about letting a standard function decide which are numbers:
which(!is.na(suppressWarnings(as.numeric(myvector
Also works with numbers in scientific notation and (presumably) different
decimal characters, e.g. comma if that's what the locale uses.
-Original Message-
From:
I’m seeking to design a MaxDiff experiment that will have a number of blocks of
this type:
Which of these items is the
most important?
Which of these items is the
least important?
Item 1
Item 2
Item 3
Item 4
I’m seeking to use the choiceDes package
On Thu, Mar 12, 2015 at 2:43 PM, Steve Taylor steve.tay...@aut.ac.nz wrote:
How about letting a standard function decide which are numbers:
which(!is.na(suppressWarnings(as.numeric(myvector
Also works with numbers in scientific notation and (presumably) different
decimal characters,
It's really not a job for the write.* functions, but for the
string-handling functions.
Here's a slightly clunky possibility:
# use your example
s.df - read.csv(text='cola,colb\n1,2\n2,3\n')
# turn a data frame into a string
paste(
paste(colnames(s.df), collapse=,),
paste(apply(s.df, 1,
Hello,
Maybe using text connections. See ?textConnection.
tc - textConnection(foo, w)
s - 'cola,colb\n1,2\n2,3\n'
cat(s, file = tc)
close(tc)
foo
read.csv(text = foo)
Hope this helps,
Rui Barradas
Em 12-03-2015 17:15, Thomas Nyberg escreveu:
Hello,
I've found the following useful
In contrast to using a package manager as others have suggested, you can
download the Source Code for all Platforms from CRAN (currently
R-3.1.3.tar.gz), unpack it somewhere, and follow the instructions in the
INSTALL file. This has worked well for me.
I don't advise one method in preference to
On Thu, Mar 12, 2015 at 9:52 PM, John McKown
john.archie.mck...@gmail.com wrote:
[...]
One problem is that Adrian wanted, for some reason, to exclude numbers
such as 2. but accept 2.0 . That is, no unnecessary trailing
decimal point. as.numeric() will not fail on 2. since that is a
number.
Axel, I am running SL 6.5. I use EPEL for R related things without much
hassle.
FWIW,
Stephen
On Thu, Mar 12, 2015 at 3:39 PM, Axel Urbiz axel.ur...@gmail.com wrote:
Hello,
My apologies if this is not the right place to post this question.
I need to get R installed on a Linux Red Hat
Par evitar el warning
DT=data.table(col1=1:10)
DT[,col2:=diff(log(c(1,col1)))]
DT
col1 col2
1:1 0.000
2:2 0.6931472
3:3 0.4054651
4:4 0.2876821
5:5 0.2231436
6:6 0.1823216
7:7 0.1541507
8:8 0.1335314
9:9 0.1177830
10: 10 0.1053605
Hola.
En un documento rmarkdown quiero utilizar el paquete texreg y más
concretamente la función htmlreg para mostrar los resultados de unos
modelos en una tabla htlm, pero no doy con la forma de que salga bien.
¿Alguna idea?
Parte de mi código
```{r, echo=FALSE, results='hide'}
Dear R-forum!
I would like to hear if someone know off some good introductory classes in
Denmark? E.g. one week course with teaching in basic R (how to read/export
in data into/from R with emphasis on txt, csv. and database, how to do
basic operations on data frames and vectors, how to plot data
I am trying to extract information “OS Vendor” and “OS Name” from the
following text file online.
http://spec.org/jEnterprise2010/results/res2013q3/jEnterprise2010-20130904-00045.txt
My goal is to extract these two attributes from all the text files
available from this link given below and
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